Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 BTF3P10-201ENST00000433415 495 ntBASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 RPL23AP2-201ENST00000471227 466 ntBASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 RN7SL810P-201ENST00000493031 276 ntBASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 AK4P6-201ENST00000505168 528 ntBASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 CCNG2P1-201ENST00000549521 1000 ntBASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 FKBP1BP1-201ENST00000553366 325 ntBASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 AC090515.3-201ENST00000560431 315 ntBASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 AC010547.7-201ENST00000570323 333 ntBASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 AC005261.4-201ENST00000600047 1385 ntBASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 TCP11X1-202ENST00000622971 1372 ntBASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.96□□□□□ -1.45
SHANK3Q9BYB0 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
SHANK3Q9BYB0 LINC00622-201ENST00000562811 1570 ntBASIC5.96□□□□□ -1.46
SHANK3Q9BYB0 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC5.96□□□□□ -1.46
SHANK3Q9BYB0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SHANK3Q9BYB0 RPS27AP11-201ENST00000402798 447 ntBASIC5.96□□□□□ -1.46
SHANK3Q9BYB0 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.96□□□□□ -1.46
SHANK3Q9BYB0 AL139095.3-201ENST00000419672 1203 ntBASIC5.96□□□□□ -1.46
SHANK3Q9BYB0 COX6CP15-201ENST00000426313 211 ntBASIC5.96□□□□□ -1.46
SHANK3Q9BYB0 H2AFZP5-201ENST00000446960 382 ntBASIC5.96□□□□□ -1.46
SHANK3Q9BYB0 AC053481.1-201ENST00000467217 306 ntBASIC5.96□□□□□ -1.46
SHANK3Q9BYB0 UQCRHP4-201ENST00000471686 272 ntBASIC5.96□□□□□ -1.46
SHANK3Q9BYB0 RPS27AP16-201ENST00000492222 470 ntBASIC5.96□□□□□ -1.46
SHANK3Q9BYB0 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.96□□□□□ -1.46
SHANK3Q9BYB0 RPL23AP53-201ENST00000521854 457 ntBASIC5.96□□□□□ -1.46
SHANK3Q9BYB0 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.96□□□□□ -1.46
SHANK3Q9BYB0 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SHANK3Q9BYB0 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHANK3Q9BYB0 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC5.95□□□□□ -1.46
SHANK3Q9BYB0 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHANK3Q9BYB0 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHANK3Q9BYB0 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.95□□□□□ -1.46
SHANK3Q9BYB0 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.95□□□□□ -1.46
SHANK3Q9BYB0 MTCO1P54-201ENST00000430139 712 ntBASIC5.95□□□□□ -1.46
SHANK3Q9BYB0 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.95□□□□□ -1.46
SHANK3Q9BYB0 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.95□□□□□ -1.46
SHANK3Q9BYB0 AC008481.1-201ENST00000463278 396 ntBASIC5.95□□□□□ -1.46
SHANK3Q9BYB0 AC021660.1-201ENST00000465006 554 ntBASIC5.95□□□□□ -1.46
SHANK3Q9BYB0 AC105137.1-201ENST00000484355 562 ntBASIC5.95□□□□□ -1.46
SHANK3Q9BYB0 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.95□□□□□ -1.46
SHANK3Q9BYB0 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.95□□□□□ -1.46
SHANK3Q9BYB0 AL356121.2-201ENST00000624715 780 ntBASIC5.95□□□□□ -1.46
SHANK3Q9BYB0 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.95□□□□□ -1.46
SHANK3Q9BYB0 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC5.95□□□□□ -1.46
SHANK3Q9BYB0 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHANK3Q9BYB0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHANK3Q9BYB0 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.95□□□□□ -1.46
SHANK3Q9BYB0 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 RNU11-201ENST00000387069 134 ntBASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 MYL12BP2-201ENST00000503948 512 ntBASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 MIR3200-201ENST00000580767 85 ntBASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 AL360012.1-201ENST00000602813 131 ntBASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 AL391684.1-202ENST00000641293 1636 ntBASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 AC025031.4-201ENST00000621248 3271 ntBASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 EIF2AP4-201ENST00000424793 1781 ntBASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 AC008549.2-201ENST00000333482 706 ntBASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 PTMAP2-201ENST00000397627 327 ntBASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 BOLA3P4-201ENST00000418151 400 ntBASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 CDY14P-201ENST00000431260 1014 ntBASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 CDY12P-201ENST00000440679 1015 ntBASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 RPS3AP12-201ENST00000443616 753 ntBASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 CDY13P-201ENST00000445813 1015 ntBASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 RPL23AP43-201ENST00000446445 471 ntBASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 CDY23P-201ENST00000451661 1014 ntBASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
SHANK3Q9BYB0 AL354984.3-201ENST00000604803 325 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms