Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC42Q96M95 H2AFZP5-201ENST00000446960 382 ntBASIC4.99□□□□□ -1.61
CCDC42Q96M95 MYO5BP2-201ENST00000449815 1277 ntBASIC4.99□□□□□ -1.61
CCDC42Q96M95 AURKAPS2-201ENST00000454983 333 ntBASIC4.99□□□□□ -1.61
CCDC42Q96M95 GAPDHP56-201ENST00000506031 988 ntBASIC4.99□□□□□ -1.61
CCDC42Q96M95 AC098799.3-201ENST00000506095 438 ntBASIC4.99□□□□□ -1.61
CCDC42Q96M95 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC42Q96M95 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC42Q96M95 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC42Q96M95 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC42Q96M95 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC42Q96M95 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC42Q96M95 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC42Q96M95 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC42Q96M95 AP001005.3-201ENST00000622049 129 ntBASIC4.99□□□□□ -1.61
CCDC42Q96M95 OR8A1-204ENST00000642111 1145 ntBASIC4.99□□□□□ -1.61
CCDC42Q96M95 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC42Q96M95 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC42Q96M95 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CCDC42Q96M95 IRF5P1-201ENST00000504852 2164 ntBASIC4.99□□□□□ -1.61
CCDC42Q96M95 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC42Q96M95 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC42Q96M95 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC42Q96M95 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC42Q96M95 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC42Q96M95 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC42Q96M95 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC42Q96M95 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC42Q96M95 RNU6-171P-201ENST00000384354 107 ntBASIC4.98□□□□□ -1.61
CCDC42Q96M95 RNA5SP146-201ENST00000410743 123 ntBASIC4.98□□□□□ -1.61
CCDC42Q96M95 RNU2-22P-201ENST00000411266 212 ntBASIC4.98□□□□□ -1.61
CCDC42Q96M95 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC42Q96M95 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC42Q96M95 AC113430.1-201ENST00000506872 718 ntBASIC4.98□□□□□ -1.61
CCDC42Q96M95 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC42Q96M95 GCSHP4-201ENST00000538792 439 ntBASIC4.98□□□□□ -1.61
CCDC42Q96M95 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.98□□□□□ -1.61
CCDC42Q96M95 AC007225.2-201ENST00000562529 256 ntBASIC4.98□□□□□ -1.61
CCDC42Q96M95 AC012146.2-201ENST00000576545 416 ntBASIC4.98□□□□□ -1.61
CCDC42Q96M95 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC42Q96M95 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC42Q96M95 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CCDC42Q96M95 AC055839.1-201ENST00000634467 498 ntBASIC4.98□□□□□ -1.61
CCDC42Q96M95 SAMMSON-226ENST00000642089 1582 ntBASIC4.98□□□□□ -1.61
CCDC42Q96M95 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.98□□□□□ -1.61
CCDC42Q96M95 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC42Q96M95 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CCDC42Q96M95 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC42Q96M95 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC42Q96M95 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC42Q96M95 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC42Q96M95 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CCDC42Q96M95 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC42Q96M95 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC42Q96M95 U8.4-201ENST00000363626 134 ntBASIC4.97□□□□□ -1.61
CCDC42Q96M95 SNORA74A-201ENST00000364089 198 ntBASIC4.97□□□□□ -1.61
CCDC42Q96M95 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC42Q96M95 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC42Q96M95 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC42Q96M95 CHMP1B2P-201ENST00000399581 597 ntBASIC4.97□□□□□ -1.61
CCDC42Q96M95 RN7SKP273-201ENST00000411392 314 ntBASIC4.97□□□□□ -1.61
CCDC42Q96M95 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC42Q96M95 AC004690.1-201ENST00000418216 328 ntBASIC4.97□□□□□ -1.61
CCDC42Q96M95 AC093162.1-201ENST00000419682 124 ntBASIC4.97□□□□□ -1.61
CCDC42Q96M95 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC42Q96M95 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC42Q96M95 AC106872.4-201ENST00000510050 523 ntBASIC4.97□□□□□ -1.61
CCDC42Q96M95 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC42Q96M95 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC42Q96M95 AC090151.1-201ENST00000520784 730 ntBASIC4.97□□□□□ -1.61
CCDC42Q96M95 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.97□□□□□ -1.61
CCDC42Q96M95 MIR3176-201ENST00000582210 90 ntBASIC4.97□□□□□ -1.61
CCDC42Q96M95 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC42Q96M95 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC42Q96M95 AL121612.2-201ENST00000612261 482 ntBASIC4.97□□□□□ -1.61
CCDC42Q96M95 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC42Q96M95 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC42Q96M95 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC42Q96M95 AL592182.3-201ENST00000642132 3304 ntBASIC4.97□□□□□ -1.61
CCDC42Q96M95 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC42Q96M95 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC42Q96M95 AL391684.1-202ENST00000641293 1636 ntBASIC4.97□□□□□ -1.61
CCDC42Q96M95 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC42Q96M95 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC42Q96M95 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC42Q96M95 OR51C1P-202ENST00000641159 1444 ntBASIC4.97□□□□□ -1.61
CCDC42Q96M95 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
CCDC42Q96M95 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.96□□□□□ -1.61
CCDC42Q96M95 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
CCDC42Q96M95 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC42Q96M95 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC42Q96M95 MTHFD2P5-201ENST00000320415 844 ntBASIC4.96□□□□□ -1.62
CCDC42Q96M95 RNU4-4P-201ENST00000364588 130 ntBASIC4.96□□□□□ -1.62
CCDC42Q96M95 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC42Q96M95 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC42Q96M95 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC42Q96M95 OR2B7P-201ENST00000429302 934 ntBASIC4.96□□□□□ -1.62
CCDC42Q96M95 RPL23AP25-201ENST00000430973 463 ntBASIC4.96□□□□□ -1.62
CCDC42Q96M95 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC42Q96M95 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms