Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC079075.1-201ENST00000559543 878 ntBASIC4.92□□□□□ -1.62
C9orf72Q96LT7 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.92□□□□□ -1.62
C9orf72Q96LT7 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.92□□□□□ -1.62
C9orf72Q96LT7 AC233702.9-201ENST00000581528 203 ntBASIC4.92□□□□□ -1.62
C9orf72Q96LT7 MIR4480-201ENST00000582492 71 ntBASIC4.92□□□□□ -1.62
C9orf72Q96LT7 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.92□□□□□ -1.62
C9orf72Q96LT7 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.92□□□□□ -1.62
C9orf72Q96LT7 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.92□□□□□ -1.62
C9orf72Q96LT7 FAM25E-202ENST00000608562 189 ntBASIC4.92□□□□□ -1.62
C9orf72Q96LT7 AL136295.6-201ENST00000610486 658 ntBASIC4.92□□□□□ -1.62
C9orf72Q96LT7 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.92□□□□□ -1.62
C9orf72Q96LT7 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.92□□□□□ -1.62
C9orf72Q96LT7 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.92□□□□□ -1.62
C9orf72Q96LT7 AC006453.5-201ENST00000636451 619 ntBASIC4.92□□□□□ -1.62
C9orf72Q96LT7 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.92□□□□□ -1.62
C9orf72Q96LT7 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
C9orf72Q96LT7 AC139713.2-215ENST00000641428 5037 ntBASIC4.92□□□□□ -1.62
C9orf72Q96LT7 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.92□□□□□ -1.62
C9orf72Q96LT7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
C9orf72Q96LT7 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.91□□□□□ -1.62
C9orf72Q96LT7 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 RN7SKP95-201ENST00000362860 303 ntBASIC4.91□□□□□ -1.62
C9orf72Q96LT7 RNA5SP428-201ENST00000365129 132 ntBASIC4.91□□□□□ -1.62
C9orf72Q96LT7 BMS1P3-201ENST00000372011 932 ntBASIC4.91□□□□□ -1.62
C9orf72Q96LT7 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 AL035419.1-201ENST00000397037 564 ntBASIC4.91□□□□□ -1.62
C9orf72Q96LT7 VDAC2P1-201ENST00000399358 958 ntBASIC4.91□□□□□ -1.62
C9orf72Q96LT7 Z97832.1-201ENST00000402490 328 ntBASIC4.91□□□□□ -1.62
C9orf72Q96LT7 ARL4AP5-201ENST00000404372 599 ntBASIC4.91□□□□□ -1.62
C9orf72Q96LT7 RPL37P18-201ENST00000411602 243 ntBASIC4.91□□□□□ -1.62
C9orf72Q96LT7 COX6B1P1-201ENST00000415962 213 ntBASIC4.91□□□□□ -1.62
C9orf72Q96LT7 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 AC140172.1-201ENST00000502928 141 ntBASIC4.91□□□□□ -1.62
C9orf72Q96LT7 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 RNA5SP392-201ENST00000516905 112 ntBASIC4.91□□□□□ -1.62
C9orf72Q96LT7 AC008033.2-201ENST00000542626 177 ntBASIC4.91□□□□□ -1.62
C9orf72Q96LT7 FKBP1BP1-201ENST00000553366 325 ntBASIC4.91□□□□□ -1.62
C9orf72Q96LT7 AC093249.4-201ENST00000564755 259 ntBASIC4.91□□□□□ -1.62
C9orf72Q96LT7 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 TVP23CP2-201ENST00000571473 623 ntBASIC4.91□□□□□ -1.62
C9orf72Q96LT7 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 AC005086.4-201ENST00000623065 213 ntBASIC4.91□□□□□ -1.62
C9orf72Q96LT7 AC091953.3-201ENST00000623220 236 ntBASIC4.91□□□□□ -1.62
C9orf72Q96LT7 AC073342.3-201ENST00000624211 193 ntBASIC4.91□□□□□ -1.62
C9orf72Q96LT7 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 MTND5P23-201ENST00000430812 1655 ntBASIC4.91□□□□□ -1.62
C9orf72Q96LT7 AC245100.2-201ENST00000454544 1679 ntBASIC4.91□□□□□ -1.62
C9orf72Q96LT7 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
C9orf72Q96LT7 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.62
C9orf72Q96LT7 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.9□□□□□ -1.62
C9orf72Q96LT7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
C9orf72Q96LT7 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
C9orf72Q96LT7 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
C9orf72Q96LT7 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
C9orf72Q96LT7 AL080315.1-201ENST00000406055 466 ntBASIC4.9□□□□□ -1.63
C9orf72Q96LT7 RNA5SP345-201ENST00000410646 108 ntBASIC4.9□□□□□ -1.63
C9orf72Q96LT7 CHEK2P3-201ENST00000416118 248 ntBASIC4.9□□□□□ -1.63
C9orf72Q96LT7 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.9□□□□□ -1.63
C9orf72Q96LT7 OR2AM1P-201ENST00000422137 422 ntBASIC4.9□□□□□ -1.63
C9orf72Q96LT7 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.9□□□□□ -1.63
C9orf72Q96LT7 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.9□□□□□ -1.63
C9orf72Q96LT7 NPM1P33-201ENST00000438918 872 ntBASIC4.9□□□□□ -1.63
C9orf72Q96LT7 SNRPFP2-201ENST00000440710 251 ntBASIC4.9□□□□□ -1.63
C9orf72Q96LT7 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.9□□□□□ -1.63
C9orf72Q96LT7 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.9□□□□□ -1.63
C9orf72Q96LT7 RPL7P16-201ENST00000479738 738 ntBASIC4.9□□□□□ -1.63
C9orf72Q96LT7 NPM1P29-201ENST00000483112 803 ntBASIC4.9□□□□□ -1.63
C9orf72Q96LT7 RN7SL558P-201ENST00000497468 299 ntBASIC4.9□□□□□ -1.63
C9orf72Q96LT7 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.9□□□□□ -1.63
C9orf72Q96LT7 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.9□□□□□ -1.63
C9orf72Q96LT7 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.9□□□□□ -1.63
C9orf72Q96LT7 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.9□□□□□ -1.63
C9orf72Q96LT7 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.9□□□□□ -1.63
C9orf72Q96LT7 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.9□□□□□ -1.63
C9orf72Q96LT7 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.9□□□□□ -1.63
C9orf72Q96LT7 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.9□□□□□ -1.63
C9orf72Q96LT7 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
C9orf72Q96LT7 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.9□□□□□ -1.63
C9orf72Q96LT7 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms