Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AURKAPS1-201ENST00000451805 1212 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AC011225.1-201ENST00000457751 369 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 TPT1P1-201ENST00000458495 518 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 RNU6-1004P-201ENST00000516584 111 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 OR11J2P-201ENST00000555298 907 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AP000769.2-201ENST00000602344 396 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AL606834.3-201ENST00000602615 496 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AC018754.1-201ENST00000607486 925 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AC063944.3-201ENST00000609969 533 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AC011472.4-201ENST00000615848 491 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AL669942.2-201ENST00000620352 697 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AC011815.3-201ENST00000624194 473 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AC073869.8-201ENST00000641806 335 ntBASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
CHMP4CQ96CF2 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 SNORA5.1-201ENST00000384275 131 ntBASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 MIR143-201ENST00000385300 106 ntBASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 AL445213.1-201ENST00000412589 747 ntBASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 DPY19L1P2-201ENST00000426647 915 ntBASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 ETF1P3-201ENST00000430422 1160 ntBASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 AC022133.1-201ENST00000490961 571 ntBASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 AC118282.1-201ENST00000506408 765 ntBASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 AC021193.1-201ENST00000511607 420 ntBASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 IGLV2-28-201ENST00000520681 304 ntBASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 NMNAT1P5-201ENST00000559657 841 ntBASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 AC109583.2-201ENST00000617367 129 ntBASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 AP002505.2-201ENST00000623585 696 ntBASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 AC109780.1-201ENST00000451768 1344 ntBASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CHMP4CQ96CF2 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 RNU1-19P-201ENST00000363306 165 ntBASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 U3.7-201ENST00000363668 216 ntBASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 RNU6-452P-201ENST00000384406 107 ntBASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 PPIAP9-201ENST00000403866 498 ntBASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 RPL7AP49-201ENST00000429522 581 ntBASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 AL591438.1-201ENST00000433508 581 ntBASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 SPRYD7P1-201ENST00000443861 570 ntBASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 GAPDHP14-201ENST00000450472 937 ntBASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 AC008280.2-201ENST00000455473 307 ntBASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 RN7SL799P-201ENST00000475891 298 ntBASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 OR5M14P-201ENST00000506803 618 ntBASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 PGAM1P13-201ENST00000507497 754 ntBASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 AC011611.5-201ENST00000552477 578 ntBASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms