Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 SEC63P1-201ENST00000425785 1258 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 NANOGP4-201ENST00000427230 913 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 MTCYBP21-201ENST00000443300 1113 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AC027338.1-201ENST00000514840 825 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AC024405.1-201ENST00000532521 1042 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 OSBPL9P3-201ENST00000534523 595 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AC090022.1-201ENST00000546569 311 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 BNIP3P1-201ENST00000547295 580 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AC008814.1-201ENST00000603797 406 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AL499605.1-201ENST00000604628 403 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AL096712.1-201ENST00000614561 159 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AL359742.1-201ENST00000622497 540 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 CU639417.4-201ENST00000623928 207 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AC007683.2-201ENST00000624681 714 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AC006042.3-201ENST00000454684 1469 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 OR13C1P-202ENST00000641378 2919 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AL022393.1-201ENST00000625142 1677 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 AL672167.1-204ENST00000641875 3017 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 MIR133B-201ENST00000362210 119 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 RN7SKP224-201ENST00000364140 325 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 MIR1271-201ENST00000408537 86 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 UBE2V1P11-201ENST00000411559 285 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 SLC20A1P1-201ENST00000413906 956 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 LINC01881-201ENST00000416103 412 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 MTND4P11-201ENST00000417020 1058 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 NPM1P24-201ENST00000428039 894 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 EIF2S2P3-201ENST00000428356 999 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 AL031663.1-201ENST00000437445 219 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 HMGN1P2-201ENST00000445197 310 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 RN7SL168P-201ENST00000463821 279 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 AC104687.1-201ENST00000485829 412 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 RNU6-1102P-201ENST00000516149 96 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 TOMM20P1-201ENST00000534518 427 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 AC079148.1-201ENST00000565944 819 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 RBM22P1-201ENST00000578589 1214 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 AC011840.5-201ENST00000582125 771 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 AC005034.4-201ENST00000603612 899 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 AC000068.2-201ENST00000608816 460 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 AC108359.1-201ENST00000616451 1211 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 AC015726.3-201ENST00000624501 418 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 NEAT1-202ENST00000501122 22743 ntBASIC4.98□□□□□ -1.61
VPS33AQ96AX1 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms