Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC037198.2-201ENST00000478845 733 ntBASIC6.02□□□□□ -1.45
HPS3Q969F9 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HPS3Q969F9 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.02□□□□□ -1.45
HPS3Q969F9 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.02□□□□□ -1.45
HPS3Q969F9 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.02□□□□□ -1.45
HPS3Q969F9 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC6.02□□□□□ -1.45
HPS3Q969F9 AC008837.1-201ENST00000511513 412 ntBASIC6.02□□□□□ -1.45
HPS3Q969F9 AC093752.1-206ENST00000511823 336 ntBASIC6.02□□□□□ -1.45
HPS3Q969F9 NRBF2P4-201ENST00000520874 850 ntBASIC6.02□□□□□ -1.45
HPS3Q969F9 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC6.02□□□□□ -1.45
HPS3Q969F9 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC6.02□□□□□ -1.45
HPS3Q969F9 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HPS3Q969F9 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HPS3Q969F9 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.02□□□□□ -1.45
HPS3Q969F9 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.02□□□□□ -1.45
HPS3Q969F9 AC087897.1-201ENST00000550134 156 ntBASIC6.02□□□□□ -1.45
HPS3Q969F9 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC6.02□□□□□ -1.45
HPS3Q969F9 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
HPS3Q969F9 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
HPS3Q969F9 SNORD95-201ENST00000579879 68 ntBASIC6.02□□□□□ -1.45
HPS3Q969F9 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.02□□□□□ -1.45
HPS3Q969F9 AC104695.2-201ENST00000605056 775 ntBASIC6.02□□□□□ -1.45
HPS3Q969F9 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.02□□□□□ -1.45
HPS3Q969F9 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.02□□□□□ -1.45
HPS3Q969F9 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HPS3Q969F9 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC6.02□□□□□ -1.45
HPS3Q969F9 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HPS3Q969F9 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HPS3Q969F9 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
HPS3Q969F9 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HPS3Q969F9 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HPS3Q969F9 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HPS3Q969F9 CCT8P1-201ENST00000413611 1657 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HPS3Q969F9 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.01□□□□□ -1.45
HPS3Q969F9 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
HPS3Q969F9 AL133268.1-201ENST00000405676 1401 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 GTF2H2B-203ENST00000508065 1432 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HPS3Q969F9 AC073055.1-201ENST00000456901 1621 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.01□□□□□ -1.45
HPS3Q969F9 AC092681.1-201ENST00000297369 291 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HPS3Q969F9 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HPS3Q969F9 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HPS3Q969F9 SNORD65C-201ENST00000390962 71 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 HMGB3P18-201ENST00000406327 590 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 AC092638.1-201ENST00000411966 1275 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 AC013404.1-201ENST00000413068 249 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 TCEA1P4-201ENST00000415066 844 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 AL449283.1-202ENST00000418249 604 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 GNG5P5-201ENST00000420444 220 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 AC246680.2-201ENST00000422106 389 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.01□□□□□ -1.45
HPS3Q969F9 MTND1P26-201ENST00000440488 538 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 OR10R1P-201ENST00000441524 1141 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 RNU7-27P-201ENST00000459281 62 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HPS3Q969F9 AC104687.1-201ENST00000485829 412 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 RPS12P31-201ENST00000491419 398 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.01□□□□□ -1.45
HPS3Q969F9 HMGN1P9-201ENST00000515212 298 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.01□□□□□ -1.45
HPS3Q969F9 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.01□□□□□ -1.45
HPS3Q969F9 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.01□□□□□ -1.45
HPS3Q969F9 MIR548Y-201ENST00000582739 110 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 MIR4443-201ENST00000585052 53 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 AC119501.1-201ENST00000603646 475 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HPS3Q969F9 AC000068.2-201ENST00000608816 460 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 AC009464.1-201ENST00000615731 469 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC6.01□□□□□ -1.45
HPS3Q969F9 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HPS3Q969F9 AP000676.4-201ENST00000624659 623 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.01□□□□□ -1.45
HPS3Q969F9 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
HPS3Q969F9 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.01□□□□□ -1.45
HPS3Q969F9 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HPS3Q969F9 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HPS3Q969F9 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.01□□□□□ -1.45
HPS3Q969F9 AC007996.1-201ENST00000620414 2821 ntBASIC6.01□□□□□ -1.45
HPS3Q969F9 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.01□□□□□ -1.45
HPS3Q969F9 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HPS3Q969F9 CASC19-284ENST00000642142 1868 ntBASIC6□□□□□ -1.45
HPS3Q969F9 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6□□□□□ -1.45
HPS3Q969F9 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
HPS3Q969F9 RARSP1-201ENST00000542842 1418 ntBASIC6□□□□□ -1.45
HPS3Q969F9 AC099786.3-201ENST00000565735 1410 ntBASIC6□□□□□ -1.45
HPS3Q969F9 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
HPS3Q969F9 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
HPS3Q969F9 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6□□□□□ -1.45
HPS3Q969F9 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6□□□□□ -1.45
HPS3Q969F9 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
HPS3Q969F9 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC6□□□□□ -1.45
HPS3Q969F9 ANKRD36P1-201ENST00000344424 659 ntBASIC6□□□□□ -1.45
HPS3Q969F9 MIR133A2-201ENST00000347538 102 ntBASIC6□□□□□ -1.45
HPS3Q969F9 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6□□□□□ -1.45
HPS3Q969F9 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC6□□□□□ -1.45
HPS3Q969F9 RNU4-2-201ENST00000365668 141 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms