Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HMGB4Q8WW32 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 RN7SKP222-201ENST00000410651 315 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 NIPA2P1-201ENST00000426223 976 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 RPL7P56-201ENST00000429441 717 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 RPL12P17-201ENST00000432393 498 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 USP24P1-201ENST00000433802 779 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 EXOSC3P1-201ENST00000448649 500 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 AL009048.1-201ENST00000450437 298 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 AC092754.1-201ENST00000472975 479 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 AC083982.1-201ENST00000485679 344 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 HPRT1P1-201ENST00000509498 657 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 IMPA1P1-201ENST00000510718 842 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 AC024940.3-201ENST00000538551 316 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 AC011611.5-201ENST00000552477 578 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 OR11H3P-201ENST00000554547 982 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 MTCO2P2-201ENST00000591258 225 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 AP001267.4-201ENST00000602598 545 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 AC104785.1-201ENST00000603220 588 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 AP002906.1-201ENST00000603405 233 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 FRG1HP-204ENST00000617940 757 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 AL078595.3-201ENST00000623815 1166 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 AL078621.3-201ENST00000623707 2042 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 OR4F13P-202ENST00000560066 2054 ntBASIC5.41□□□□□ -1.54
HMGB4Q8WW32 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.41□□□□□ -1.54
HMGB4Q8WW32 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 AC138907.8-201ENST00000623981 2256 ntBASIC5.4□□□□□ -1.54
HMGB4Q8WW32 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 RNA5SP27-201ENST00000363839 119 ntBASIC5.4□□□□□ -1.54
HMGB4Q8WW32 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 U6.112-201ENST00000384129 70 ntBASIC5.4□□□□□ -1.54
HMGB4Q8WW32 RNU6-932P-201ENST00000391108 106 ntBASIC5.4□□□□□ -1.54
HMGB4Q8WW32 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 AL590399.2-201ENST00000427536 309 ntBASIC5.4□□□□□ -1.54
HMGB4Q8WW32 FABP7P2-201ENST00000429946 379 ntBASIC5.4□□□□□ -1.54
HMGB4Q8WW32 MTCO1P53-201ENST00000441633 699 ntBASIC5.4□□□□□ -1.54
HMGB4Q8WW32 HSFY3P-201ENST00000444242 1191 ntBASIC5.4□□□□□ -1.54
HMGB4Q8WW32 H2AFZP6-201ENST00000444403 394 ntBASIC5.4□□□□□ -1.54
HMGB4Q8WW32 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 IGBP1P3-201ENST00000447449 1000 ntBASIC5.4□□□□□ -1.54
HMGB4Q8WW32 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 RPS3AP53-201ENST00000454716 778 ntBASIC5.4□□□□□ -1.54
HMGB4Q8WW32 Z92846.1-201ENST00000456203 268 ntBASIC5.4□□□□□ -1.54
HMGB4Q8WW32 AC090058.1-201ENST00000498788 435 ntBASIC5.4□□□□□ -1.54
HMGB4Q8WW32 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 AC004980.4-201ENST00000513375 203 ntBASIC5.4□□□□□ -1.54
HMGB4Q8WW32 AC091163.3-201ENST00000518269 1144 ntBASIC5.4□□□□□ -1.54
HMGB4Q8WW32 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.4□□□□□ -1.54
HMGB4Q8WW32 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms