Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 RN7SKP227-201ENST00000364445 330 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 AL359837.1-201ENST00000381357 287 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 U3.22-201ENST00000391120 215 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 AL049697.2-201ENST00000403708 294 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 U3.35-201ENST00000408405 208 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 CHEK2P3-201ENST00000416118 248 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 AC092162.1-201ENST00000432828 434 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 NIP7P2-201ENST00000485801 544 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 AC091167.1-201ENST00000492017 396 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 RNU1-6P-201ENST00000516290 144 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 AC034105.4-201ENST00000568304 277 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 MIR4737-201ENST00000583979 81 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 AL512782.1-201ENST00000603093 364 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 AL122126.1-201ENST00000546905 1318 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 AL022393.1-201ENST00000625142 1677 ntBASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SHROOM3Q8TF72 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 RN7SKP267-201ENST00000410381 285 ntBASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 AC006065.1-201ENST00000422539 802 ntBASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 ARL2BPP10-201ENST00000446487 531 ntBASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 RPS5P7-201ENST00000456664 608 ntBASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 AC073073.1-201ENST00000493920 463 ntBASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 RN7SKP122-201ENST00000515923 296 ntBASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 IGKV1-32-201ENST00000519290 311 ntBASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 AP000619.2-201ENST00000546014 969 ntBASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 AL139041.1-201ENST00000605480 610 ntBASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SHROOM3Q8TF72 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SHROOM3Q8TF72 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.84□□□□□ -1.64
SHROOM3Q8TF72 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.84□□□□□ -1.64
SHROOM3Q8TF72 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.84□□□□□ -1.64
SHROOM3Q8TF72 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
SHROOM3Q8TF72 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
SHROOM3Q8TF72 AL132640.2-201ENST00000559968 1698 ntBASIC4.84□□□□□ -1.64
SHROOM3Q8TF72 AC017079.1-201ENST00000333650 415 ntBASIC4.84□□□□□ -1.64
SHROOM3Q8TF72 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SHROOM3Q8TF72 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.84□□□□□ -1.64
SHROOM3Q8TF72 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.64
SHROOM3Q8TF72 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.84□□□□□ -1.64
SHROOM3Q8TF72 OR52J1P-201ENST00000450596 932 ntBASIC4.84□□□□□ -1.64
SHROOM3Q8TF72 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.84□□□□□ -1.64
SHROOM3Q8TF72 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.84□□□□□ -1.64
SHROOM3Q8TF72 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.84□□□□□ -1.64
SHROOM3Q8TF72 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.84□□□□□ -1.64
SHROOM3Q8TF72 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.84□□□□□ -1.64
SHROOM3Q8TF72 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.84□□□□□ -1.64
SHROOM3Q8TF72 AC125494.2-201ENST00000602431 657 ntBASIC4.84□□□□□ -1.64
SHROOM3Q8TF72 AC135352.1-201ENST00000506173 1418 ntBASIC4.83□□□□□ -1.64
SHROOM3Q8TF72 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHROOM3Q8TF72 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHROOM3Q8TF72 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHROOM3Q8TF72 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SHROOM3Q8TF72 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHROOM3Q8TF72 RNA5SP191-201ENST00000362585 102 ntBASIC4.83□□□□□ -1.64
SHROOM3Q8TF72 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHROOM3Q8TF72 AL050305.1-201ENST00000399993 1230 ntBASIC4.83□□□□□ -1.64
SHROOM3Q8TF72 AL356390.1-201ENST00000455684 397 ntBASIC4.83□□□□□ -1.64
SHROOM3Q8TF72 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.83□□□□□ -1.64
SHROOM3Q8TF72 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.83□□□□□ -1.64
SHROOM3Q8TF72 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.83□□□□□ -1.64
SHROOM3Q8TF72 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.83□□□□□ -1.64
SHROOM3Q8TF72 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.83□□□□□ -1.64
SHROOM3Q8TF72 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.83□□□□□ -1.64
SHROOM3Q8TF72 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.83□□□□□ -1.64
SHROOM3Q8TF72 AL109766.1-201ENST00000555080 552 ntBASIC4.83□□□□□ -1.64
SHROOM3Q8TF72 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.83□□□□□ -1.64
SHROOM3Q8TF72 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHROOM3Q8TF72 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms