Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC016839.1-201ENST00000578162 867 ntBASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 AC007786.3-201ENST00000615154 596 ntBASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 AC032011.1-201ENST00000611703 1549 ntBASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 SNORA9-201ENST00000384215 133 ntBASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 AC069157.1-201ENST00000421749 137 ntBASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 AL353748.1-201ENST00000440753 474 ntBASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 RN7SL339P-201ENST00000580597 296 ntBASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
ALMS1Q8TCU4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 AL360270.2-201ENST00000562952 5985 ntBASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 TBCAP2-201ENST00000416175 326 ntBASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 AC093524.1-201ENST00000564266 1094 ntBASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 ICE2P1-201ENST00000512800 1849 ntBASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 AC009779.8-201ENST00000641684 4384 ntBASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 AC021146.4-201ENST00000309229 279 ntBASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 SNORA71.2-201ENST00000364941 134 ntBASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 AC073052.1-201ENST00000440417 714 ntBASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 VN1R34P-201ENST00000447387 883 ntBASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 PGBD4P4-201ENST00000509673 613 ntBASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 SOD1P3-201ENST00000518682 454 ntBASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 BX005214.3-202ENST00000619809 325 ntBASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 AP003497.2-201ENST00000624220 967 ntBASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 UBBP2-201ENST00000376781 231 ntBASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 RPS27AP13-201ENST00000498403 237 ntBASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 OR4A2P-201ENST00000527276 913 ntBASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 ALB-202ENST00000401494 1659 ntTSL 5 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 AC010329.1-201ENST00000593903 8328 ntBASIC3.14□□□□□ -1.91
ALMS1Q8TCU4 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 LINC02035-201ENST00000610128 5476 ntBASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 NAP1L4P1-201ENST00000319092 1157 ntBASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 NDUFA5P1-201ENST00000433858 341 ntBASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 RN7SL810P-201ENST00000493031 276 ntBASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 U3.53-201ENST00000628922 216 ntBASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ALMS1Q8TCU4 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms