Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 GXYLT1P1-201ENST00000446657 490 ntBASIC5.72□□□□□ -1.49
HERC6Q8IVU3 TPT1P12-201ENST00000448968 492 ntBASIC5.72□□□□□ -1.49
HERC6Q8IVU3 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 NDUFA12P1-201ENST00000455914 406 ntBASIC5.72□□□□□ -1.49
HERC6Q8IVU3 PSMC1P13-201ENST00000458195 985 ntBASIC5.72□□□□□ -1.49
HERC6Q8IVU3 SNORD125-201ENST00000459538 96 ntBASIC5.72□□□□□ -1.49
HERC6Q8IVU3 RPL32P14-201ENST00000463196 378 ntBASIC5.72□□□□□ -1.49
HERC6Q8IVU3 RN7SL423P-201ENST00000486202 304 ntBASIC5.72□□□□□ -1.49
HERC6Q8IVU3 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 AC111000.6-201ENST00000514471 709 ntBASIC5.72□□□□□ -1.49
HERC6Q8IVU3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 AC021006.3-201ENST00000530771 192 ntBASIC5.72□□□□□ -1.49
HERC6Q8IVU3 OR5AN2P-201ENST00000534535 896 ntBASIC5.72□□□□□ -1.49
HERC6Q8IVU3 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 AC012414.7-202ENST00000622705 1090 ntBASIC5.72□□□□□ -1.49
HERC6Q8IVU3 AL049777.1-201ENST00000622740 518 ntBASIC5.72□□□□□ -1.49
HERC6Q8IVU3 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.72□□□□□ -1.49
HERC6Q8IVU3 MTND4P9-201ENST00000507819 1346 ntBASIC5.72□□□□□ -1.49
HERC6Q8IVU3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
HERC6Q8IVU3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.49
HERC6Q8IVU3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
HERC6Q8IVU3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.71□□□□□ -1.49
HERC6Q8IVU3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
HERC6Q8IVU3 AC083899.2-201ENST00000423285 1376 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HERC6Q8IVU3 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AC092747.4-201ENST00000620519 1861 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AC011933.2-201ENST00000578539 2790 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
HERC6Q8IVU3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.71□□□□□ -1.5
HERC6Q8IVU3 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
HERC6Q8IVU3 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HERC6Q8IVU3 MTCO1P7-201ENST00000419523 1542 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HERC6Q8IVU3 RN7SKP113-201ENST00000363891 295 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 RNU1-146P-201ENST00000364015 165 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AC069282.1-201ENST00000411911 526 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AL158050.1-201ENST00000416077 457 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 VN1R42P-201ENST00000424651 344 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 RIMKLBP2-201ENST00000424737 654 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 VTI1BP4-201ENST00000427516 527 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 HSPD1P12-201ENST00000429127 1069 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AC016712.1-201ENST00000431088 378 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AL035458.1-201ENST00000433096 585 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.71□□□□□ -1.5
HERC6Q8IVU3 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.71□□□□□ -1.5
HERC6Q8IVU3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.71□□□□□ -1.5
HERC6Q8IVU3 RPL34P26-201ENST00000445636 354 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AC092685.1-201ENST00000447960 1243 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AC009963.2-201ENST00000453431 138 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AC008379.1-201ENST00000463655 464 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 HMGN2P25-201ENST00000486956 268 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 NPM1P28-201ENST00000492269 840 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.71□□□□□ -1.5
HERC6Q8IVU3 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AC025459.1-201ENST00000504072 156 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 HPRT1P1-201ENST00000509498 657 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AC121161.1-201ENST00000510606 652 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 BTF3P13-201ENST00000513224 490 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 GAPDHP62-201ENST00000515313 990 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 C1GALT1P3-201ENST00000522049 819 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
HERC6Q8IVU3 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AC084824.2-201ENST00000548906 345 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.71□□□□□ -1.5
HERC6Q8IVU3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.71□□□□□ -1.5
HERC6Q8IVU3 MIR4737-201ENST00000583979 81 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AC068790.4-201ENST00000602474 263 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AC005252.1-201ENST00000604518 1063 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AC008759.3-201ENST00000613300 508 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AC005156.1-201ENST00000613371 573 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 MIR7703-201ENST00000620784 77 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AC068880.4-201ENST00000623082 495 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 AP003476.1-201ENST00000623984 516 ntBASIC5.71□□□□□ -1.5
HERC6Q8IVU3 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
HERC6Q8IVU3 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms