Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 MIR921-201ENST00000401133 56 ntBASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 Z97832.1-201ENST00000402490 328 ntBASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 RPL21P108-201ENST00000413857 481 ntBASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 RAB9AP4-201ENST00000415230 609 ntBASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 AL513325.1-201ENST00000417716 1034 ntBASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 AC004448.2-201ENST00000422360 586 ntBASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 RPL7P57-201ENST00000423238 740 ntBASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 MTND6P18-201ENST00000439477 513 ntBASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 RPSAP39-201ENST00000467439 883 ntBASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 BX510359.5-201ENST00000515651 304 ntBASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 AC022882.1-201ENST00000532142 501 ntBASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 AP002505.2-201ENST00000623585 696 ntBASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 CASC19-264ENST00000641912 1184 ntBASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 SMG1P6-201ENST00000532337 2930 ntBASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NUDCD3Q8IVD9 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.71□□□□□ -1.65
NUDCD3Q8IVD9 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
NUDCD3Q8IVD9 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.71□□□□□ -1.65
NUDCD3Q8IVD9 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 RN7SKP104-201ENST00000362605 328 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 Y_RNA.62-201ENST00000362840 99 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 RPL5P19-201ENST00000404228 893 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 HDGFP1-201ENST00000405943 252 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 AP000936.3-201ENST00000438127 255 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 SPRYD7P1-201ENST00000443861 570 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 AL137845.2-201ENST00000444292 988 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 AC073587.1-201ENST00000447093 876 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 PTMAP3-201ENST00000447474 330 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 NDUFA5P8-201ENST00000449019 346 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 OR6C72P-201ENST00000451403 892 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 RN7SL41P-201ENST00000476144 297 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 RN7SL319P-201ENST00000480656 221 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 AC108693.1-201ENST00000496068 432 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 AC025857.1-201ENST00000525252 377 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 AC015912.2-201ENST00000571053 181 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 AC209154.1-201ENST00000582156 337 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 AL353600.1-201ENST00000608148 251 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 AC079395.2-201ENST00000610982 737 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 AC011815.3-201ENST00000624194 473 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 AL596275.2-204ENST00000641628 552 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 AL596275.2-206ENST00000641957 626 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 LINC01109-201ENST00000603837 3081 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 TLK1P1-201ENST00000456760 2440 ntBASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NUDCD3Q8IVD9 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 SNORA70-201ENST00000384436 135 ntBASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.7□□□□□ -1.66
NUDCD3Q8IVD9 BMS1P13-201ENST00000417301 885 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms