Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC124916.2-201ENST00000604416 224 ntBASIC5.2□□□□□ -1.58
PTCHD4Q6ZW05 AC245008.1-201ENST00000608123 476 ntBASIC5.2□□□□□ -1.58
PTCHD4Q6ZW05 AL139124.1-201ENST00000609123 421 ntBASIC5.2□□□□□ -1.58
PTCHD4Q6ZW05 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.2□□□□□ -1.58
PTCHD4Q6ZW05 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTCHD4Q6ZW05 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTCHD4Q6ZW05 AC131159.1-201ENST00000621854 213 ntBASIC5.2□□□□□ -1.58
PTCHD4Q6ZW05 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.2□□□□□ -1.58
PTCHD4Q6ZW05 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
PTCHD4Q6ZW05 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.2□□□□□ -1.58
PTCHD4Q6ZW05 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.2□□□□□ -1.58
PTCHD4Q6ZW05 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTCHD4Q6ZW05 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTCHD4Q6ZW05 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PTCHD4Q6ZW05 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTCHD4Q6ZW05 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 OR9K1P-202ENST00000641111 3217 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AP000357.1-201ENST00000409926 1165 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 YWHAEP5-201ENST00000431545 765 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 PNKDP1-201ENST00000435914 430 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 MTND4P32-201ENST00000437189 1237 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AP000936.3-201ENST00000438127 255 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AL353093.1-201ENST00000441292 436 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AC005077.1-201ENST00000449226 375 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 CDC42P1-201ENST00000456658 548 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AC073610.1-201ENST00000489971 396 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 DUTP1-201ENST00000493631 470 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AC091874.2-201ENST00000505889 720 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AC118282.2-201ENST00000508739 374 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AC138938.1-201ENST00000515431 782 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 PRELID3BP4-201ENST00000515476 571 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 RN7SKP238-201ENST00000516483 249 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AP000926.4-201ENST00000527351 454 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AL356057.1-201ENST00000533798 831 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AC025260.1-201ENST00000548858 430 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AC002519.2-203ENST00000567043 837 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 MIR5010-201ENST00000582846 120 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 PIGPP4-201ENST00000584447 307 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AP001269.3-201ENST00000588718 329 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 VN1R83P-201ENST00000595685 445 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AC015726.1-201ENST00000602353 681 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 Z99497.2-201ENST00000603634 310 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AL392112.1-201ENST00000605115 829 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AC010632.3-201ENST00000611377 369 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AL158163.2-201ENST00000619110 700 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.19□□□□□ -1.58
PTCHD4Q6ZW05 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC120338.1-201ENST00000625074 1541 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 BTBD10P1-201ENST00000549824 1352 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms