Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.76□□□□□ -1.65
C11orf88Q6PI97 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.76□□□□□ -1.65
C11orf88Q6PI97 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.76□□□□□ -1.65
C11orf88Q6PI97 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.76□□□□□ -1.65
C11orf88Q6PI97 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.76□□□□□ -1.65
C11orf88Q6PI97 H3F3BP2-201ENST00000583907 357 ntBASIC4.76□□□□□ -1.65
C11orf88Q6PI97 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.76□□□□□ -1.65
C11orf88Q6PI97 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.76□□□□□ -1.65
C11orf88Q6PI97 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.76□□□□□ -1.65
C11orf88Q6PI97 AL359513.1-201ENST00000614364 557 ntBASIC4.76□□□□□ -1.65
C11orf88Q6PI97 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.76□□□□□ -1.65
C11orf88Q6PI97 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.76□□□□□ -1.65
C11orf88Q6PI97 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.76□□□□□ -1.65
C11orf88Q6PI97 OR8G3P-202ENST00000641572 1255 ntBASIC4.76□□□□□ -1.65
C11orf88Q6PI97 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
C11orf88Q6PI97 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
C11orf88Q6PI97 THAP12P5-201ENST00000405864 2275 ntBASIC4.76□□□□□ -1.65
C11orf88Q6PI97 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
C11orf88Q6PI97 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
C11orf88Q6PI97 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
C11orf88Q6PI97 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
C11orf88Q6PI97 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
C11orf88Q6PI97 OR13C1P-202ENST00000641378 2919 ntBASIC4.76□□□□□ -1.65
C11orf88Q6PI97 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 OR52E6-202ENST00000379946 954 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 RNU6-1279P-201ENST00000383917 103 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 CTSL3P-202ENST00000412179 788 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 OR2AT2P-201ENST00000413438 905 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 CHEK2P5-201ENST00000423877 246 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 RPL30P3-201ENST00000424262 333 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 RIMKLBP2-201ENST00000424737 654 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AC105402.2-201ENST00000438503 358 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AL596266.1-201ENST00000448132 400 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 RPL7P31-201ENST00000450192 724 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 RPS27AP2-201ENST00000457576 465 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AL161747.1-201ENST00000480068 358 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AL136038.1-201ENST00000497246 351 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 FTH1P24-201ENST00000503502 462 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 MTATP6P22-201ENST00000507369 598 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 RNU6-1102P-201ENST00000516149 96 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 SNORA70.20-201ENST00000516848 126 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 CYCSP22-201ENST00000517555 339 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AC100784.1-201ENST00000522790 310 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AC079064.1-201ENST00000528365 362 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 PCNAP4-201ENST00000532690 730 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 IGBP1P1-201ENST00000554337 1009 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AC007225.2-201ENST00000562529 256 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 MIR4260-201ENST00000583107 67 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AC005034.4-201ENST00000603612 899 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AC011374.2-201ENST00000607135 526 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AP001033.2-201ENST00000609701 1003 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AC090607.5-201ENST00000615692 224 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AC067852.7-201ENST00000623270 535 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AC135068.5-201ENST00000624197 983 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AL590396.2-201ENST00000636511 1041 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 MIR6715B-201ENST00000637172 77 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 PDZK1P1-202ENST00000425209 1350 ntBASIC4.75□□□□□ -1.65
C11orf88Q6PI97 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
C11orf88Q6PI97 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 AC134882.1-201ENST00000603738 1676 ntBASIC4.74□□□□□ -1.65
C11orf88Q6PI97 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
C11orf88Q6PI97 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms