Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
CTR9Q6PD62 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTR9Q6PD62 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTR9Q6PD62 CASC19-204ENST00000641001 2055 ntBASIC5.81□□□□□ -1.48
CTR9Q6PD62 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTR9Q6PD62 AC008758.3-201ENST00000507003 1829 ntBASIC5.81□□□□□ -1.48
CTR9Q6PD62 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CTR9Q6PD62 AC007342.9-201ENST00000623877 1385 ntBASIC5.8□□□□□ -1.48
CTR9Q6PD62 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CTR9Q6PD62 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CTR9Q6PD62 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CTR9Q6PD62 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CTR9Q6PD62 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CTR9Q6PD62 SDAD1P1-202ENST00000524156 2051 ntBASIC5.8□□□□□ -1.48
CTR9Q6PD62 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CTR9Q6PD62 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CTR9Q6PD62 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CTR9Q6PD62 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.8□□□□□ -1.48
CTR9Q6PD62 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CTR9Q6PD62 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.8□□□□□ -1.48
CTR9Q6PD62 OR2B7P-201ENST00000429302 934 ntBASIC5.8□□□□□ -1.48
CTR9Q6PD62 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.8□□□□□ -1.48
CTR9Q6PD62 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.8□□□□□ -1.48
CTR9Q6PD62 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.8□□□□□ -1.48
CTR9Q6PD62 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.8□□□□□ -1.48
CTR9Q6PD62 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.8□□□□□ -1.48
CTR9Q6PD62 AC113430.1-201ENST00000506872 718 ntBASIC5.8□□□□□ -1.48
CTR9Q6PD62 RNU6-751P-201ENST00000516382 101 ntBASIC5.8□□□□□ -1.48
CTR9Q6PD62 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.8□□□□□ -1.48
CTR9Q6PD62 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CTR9Q6PD62 AL049839.1-201ENST00000556151 657 ntBASIC5.8□□□□□ -1.48
CTR9Q6PD62 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.8□□□□□ -1.48
CTR9Q6PD62 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.8□□□□□ -1.48
CTR9Q6PD62 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.8□□□□□ -1.48
CTR9Q6PD62 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.8□□□□□ -1.48
CTR9Q6PD62 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.8□□□□□ -1.48
CTR9Q6PD62 AL353600.1-201ENST00000608148 251 ntBASIC5.8□□□□□ -1.48
CTR9Q6PD62 AC243960.7-201ENST00000623532 707 ntBASIC5.8□□□□□ -1.48
CTR9Q6PD62 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.8□□□□□ -1.48
CTR9Q6PD62 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CTR9Q6PD62 AC097461.1-201ENST00000568928 2821 ntBASIC5.8□□□□□ -1.48
CTR9Q6PD62 AL672167.1-204ENST00000641875 3017 ntBASIC5.79□□□□□ -1.48
CTR9Q6PD62 U3.30-201ENST00000391308 210 ntBASIC5.79□□□□□ -1.48
CTR9Q6PD62 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CTR9Q6PD62 AC240504.1-201ENST00000395709 845 ntBASIC5.79□□□□□ -1.48
CTR9Q6PD62 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CTR9Q6PD62 RN7SKP100-201ENST00000411258 284 ntBASIC5.79□□□□□ -1.48
CTR9Q6PD62 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.79□□□□□ -1.48
CTR9Q6PD62 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.79□□□□□ -1.48
CTR9Q6PD62 AL645608.4-201ENST00000423619 154 ntBASIC5.79□□□□□ -1.48
CTR9Q6PD62 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.79□□□□□ -1.48
CTR9Q6PD62 UBE2V2P1-201ENST00000434717 398 ntBASIC5.79□□□□□ -1.48
CTR9Q6PD62 AC073587.1-201ENST00000447093 876 ntBASIC5.79□□□□□ -1.48
CTR9Q6PD62 RPL7L1P1-201ENST00000448259 785 ntBASIC5.79□□□□□ -1.48
CTR9Q6PD62 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.79□□□□□ -1.48
CTR9Q6PD62 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.79□□□□□ -1.48
CTR9Q6PD62 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.79□□□□□ -1.48
CTR9Q6PD62 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.79□□□□□ -1.48
CTR9Q6PD62 AP001880.2-201ENST00000538233 448 ntBASIC5.79□□□□□ -1.48
CTR9Q6PD62 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTR9Q6PD62 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.79□□□□□ -1.48
CTR9Q6PD62 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.79□□□□□ -1.48
CTR9Q6PD62 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.79□□□□□ -1.48
CTR9Q6PD62 RN7SL52P-201ENST00000584271 284 ntBASIC5.79□□□□□ -1.48
CTR9Q6PD62 AL133406.3-201ENST00000606817 541 ntBASIC5.79□□□□□ -1.48
CTR9Q6PD62 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.79□□□□□ -1.48
CTR9Q6PD62 AC073342.3-201ENST00000624211 193 ntBASIC5.79□□□□□ -1.48
CTR9Q6PD62 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.79□□□□□ -1.48
CTR9Q6PD62 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTR9Q6PD62 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTR9Q6PD62 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CTR9Q6PD62 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTR9Q6PD62 NCLP2-201ENST00000416078 1462 ntBASIC5.78□□□□□ -1.48
CTR9Q6PD62 OR14L1P-202ENST00000641545 3009 ntBASIC5.78□□□□□ -1.48
CTR9Q6PD62 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
CTR9Q6PD62 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTR9Q6PD62 MIR137-201ENST00000385223 102 ntBASIC5.78□□□□□ -1.48
CTR9Q6PD62 CYB5AP4-201ENST00000396692 399 ntBASIC5.78□□□□□ -1.48
CTR9Q6PD62 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.78□□□□□ -1.48
CTR9Q6PD62 RPL37P18-201ENST00000411602 243 ntBASIC5.78□□□□□ -1.48
CTR9Q6PD62 YY1P1-201ENST00000427625 668 ntBASIC5.78□□□□□ -1.48
CTR9Q6PD62 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.78□□□□□ -1.48
CTR9Q6PD62 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.78□□□□□ -1.48
CTR9Q6PD62 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.78□□□□□ -1.48
CTR9Q6PD62 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.78□□□□□ -1.48
CTR9Q6PD62 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.78□□□□□ -1.48
CTR9Q6PD62 AC091042.1-201ENST00000579213 173 ntBASIC5.78□□□□□ -1.48
CTR9Q6PD62 AC087468.1-201ENST00000604365 630 ntBASIC5.78□□□□□ -1.48
CTR9Q6PD62 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.78□□□□□ -1.48
CTR9Q6PD62 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.78□□□□□ -1.48
CTR9Q6PD62 MIR7703-201ENST00000620784 77 ntBASIC5.78□□□□□ -1.48
CTR9Q6PD62 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
CTR9Q6PD62 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
CTR9Q6PD62 SCN1A-220ENST00000641603 12506 ntBASIC5.77□□□□□ -1.49
CTR9Q6PD62 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.77□□□□□ -1.49
CTR9Q6PD62 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.77□□□□□ -1.49
CTR9Q6PD62 MFSD8-216ENST00000641147 4009 ntBASIC5.77□□□□□ -1.49
CTR9Q6PD62 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.77□□□□□ -1.49
CTR9Q6PD62 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CTR9Q6PD62 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms