Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 OR52E7P-201ENST00000452394 933 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AC009127.1-201ENST00000467090 155 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 RPS4XP18-201ENST00000495480 763 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 RN7SL649P-201ENST00000496974 275 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AC025445.1-201ENST00000502728 300 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 RN7SKP70-201ENST00000516655 271 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AC135001.1-201ENST00000544546 283 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 SULT1C2P2-201ENST00000562517 294 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AC105254.2-201ENST00000603636 436 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AL499605.1-201ENST00000604628 403 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AC005377.1-201ENST00000605126 456 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 COX6CP4-201ENST00000605798 228 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 MIR6780B-201ENST00000610307 79 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AC244100.4-201ENST00000617747 388 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AC074276.2-201ENST00000619891 348 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 MIR6837-201ENST00000620884 64 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AC127024.6-201ENST00000621598 424 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AC015804.1-201ENST00000622935 435 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AC087821.1-201ENST00000623639 567 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AC132825.8-201ENST00000640783 297 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 AC011155.1-201ENST00000316512 456 ntBASIC4.28□□□□□ -1.72
CCDC58Q4VC31 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.28□□□□□ -1.72
CCDC58Q4VC31 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 AP000281.1-201ENST00000444036 316 ntBASIC4.28□□□□□ -1.72
CCDC58Q4VC31 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 TDGF1P1-201ENST00000445734 527 ntBASIC4.28□□□□□ -1.72
CCDC58Q4VC31 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 AC026348.1-201ENST00000462549 1053 ntBASIC4.28□□□□□ -1.72
CCDC58Q4VC31 NDUFA5P5-201ENST00000468361 342 ntBASIC4.28□□□□□ -1.72
CCDC58Q4VC31 AC097484.1-201ENST00000471148 389 ntBASIC4.28□□□□□ -1.72
CCDC58Q4VC31 RN7SL727P-201ENST00000482164 296 ntBASIC4.28□□□□□ -1.72
CCDC58Q4VC31 RN7SL97P-201ENST00000486780 299 ntBASIC4.28□□□□□ -1.72
CCDC58Q4VC31 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 RNU6-709P-201ENST00000517257 104 ntBASIC4.28□□□□□ -1.72
CCDC58Q4VC31 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 AL049779.2-201ENST00000553847 315 ntBASIC4.28□□□□□ -1.72
CCDC58Q4VC31 AC005726.4-201ENST00000582858 458 ntBASIC4.28□□□□□ -1.72
CCDC58Q4VC31 EIF1P5-201ENST00000585002 234 ntBASIC4.28□□□□□ -1.72
CCDC58Q4VC31 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 AC023813.4-201ENST00000607580 580 ntBASIC4.28□□□□□ -1.72
CCDC58Q4VC31 AC109309.2-201ENST00000612597 332 ntBASIC4.28□□□□□ -1.72
CCDC58Q4VC31 AC004825.2-201ENST00000616634 455 ntBASIC4.28□□□□□ -1.72
CCDC58Q4VC31 AC099494.2-201ENST00000623371 978 ntBASIC4.28□□□□□ -1.72
CCDC58Q4VC31 AL353662.3-201ENST00000625131 237 ntBASIC4.28□□□□□ -1.72
CCDC58Q4VC31 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 AL121950.1-201ENST00000624993 2077 ntBASIC4.28□□□□□ -1.72
CCDC58Q4VC31 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC58Q4VC31 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.27□□□□□ -1.73
CCDC58Q4VC31 EOGT-210ENST00000615922 1931 ntBASIC4.27□□□□□ -1.73
CCDC58Q4VC31 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 Z97832.1-201ENST00000402490 328 ntBASIC4.27□□□□□ -1.73
CCDC58Q4VC31 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 RNA5SP345-201ENST00000410646 108 ntBASIC4.27□□□□□ -1.73
CCDC58Q4VC31 GSTM3P2-201ENST00000412746 530 ntBASIC4.27□□□□□ -1.73
CCDC58Q4VC31 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC58Q4VC31 RPL7P57-201ENST00000423238 740 ntBASIC4.27□□□□□ -1.73
CCDC58Q4VC31 AC106901.1-201ENST00000425086 698 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms