Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
USP41Q3LFD5 AC097173.1-201ENST00000505862 819 ntBASIC5.44□□□□□ -1.54
USP41Q3LFD5 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.44□□□□□ -1.54
USP41Q3LFD5 RNA5SP43-201ENST00000516559 110 ntBASIC5.44□□□□□ -1.54
USP41Q3LFD5 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.44□□□□□ -1.54
USP41Q3LFD5 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.44□□□□□ -1.54
USP41Q3LFD5 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.44□□□□□ -1.54
USP41Q3LFD5 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
USP41Q3LFD5 BGLT3-201ENST00000564523 994 ntBASIC5.44□□□□□ -1.54
USP41Q3LFD5 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
USP41Q3LFD5 AL031320.1-201ENST00000604177 357 ntBASIC5.44□□□□□ -1.54
USP41Q3LFD5 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.44□□□□□ -1.54
USP41Q3LFD5 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.44□□□□□ -1.54
USP41Q3LFD5 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.44□□□□□ -1.54
USP41Q3LFD5 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.44□□□□□ -1.54
USP41Q3LFD5 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.44□□□□□ -1.54
USP41Q3LFD5 AC073869.7-201ENST00000640874 297 ntBASIC5.44□□□□□ -1.54
USP41Q3LFD5 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP41Q3LFD5 AC006210.2-201ENST00000367074 1545 ntBASIC5.43□□□□□ -1.54
USP41Q3LFD5 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
USP41Q3LFD5 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP41Q3LFD5 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
USP41Q3LFD5 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USP41Q3LFD5 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP41Q3LFD5 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP41Q3LFD5 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
USP41Q3LFD5 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP41Q3LFD5 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USP41Q3LFD5 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.43□□□□□ -1.54
USP41Q3LFD5 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP41Q3LFD5 CYB5AP4-201ENST00000396692 399 ntBASIC5.43□□□□□ -1.54
USP41Q3LFD5 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USP41Q3LFD5 AC234781.4-201ENST00000419384 244 ntBASIC5.43□□□□□ -1.54
USP41Q3LFD5 MTCYBP7-201ENST00000419540 1134 ntBASIC5.43□□□□□ -1.54
USP41Q3LFD5 PTP4A1P1-201ENST00000420539 515 ntBASIC5.43□□□□□ -1.54
USP41Q3LFD5 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.43□□□□□ -1.54
USP41Q3LFD5 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.43□□□□□ -1.54
USP41Q3LFD5 SCAND3P1-201ENST00000439854 1060 ntBASIC5.43□□□□□ -1.54
USP41Q3LFD5 CEACAMP9-201ENST00000442990 513 ntBASIC5.43□□□□□ -1.54
USP41Q3LFD5 OR7E125P-201ENST00000443450 846 ntBASIC5.43□□□□□ -1.54
USP41Q3LFD5 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.43□□□□□ -1.54
USP41Q3LFD5 AC104629.1-201ENST00000494226 508 ntBASIC5.43□□□□□ -1.54
USP41Q3LFD5 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.43□□□□□ -1.54
USP41Q3LFD5 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.43□□□□□ -1.54
USP41Q3LFD5 AL671862.1-201ENST00000515851 349 ntBASIC5.43□□□□□ -1.54
USP41Q3LFD5 RNU6-1102P-201ENST00000516149 96 ntBASIC5.43□□□□□ -1.54
USP41Q3LFD5 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.43□□□□□ -1.54
USP41Q3LFD5 VTA1P2-201ENST00000520205 911 ntBASIC5.43□□□□□ -1.54
USP41Q3LFD5 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.43□□□□□ -1.54
USP41Q3LFD5 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.43□□□□□ -1.54
USP41Q3LFD5 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.43□□□□□ -1.54
USP41Q3LFD5 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
USP41Q3LFD5 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP41Q3LFD5 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.43□□□□□ -1.54
USP41Q3LFD5 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.43□□□□□ -1.54
USP41Q3LFD5 AC137768.1-201ENST00000549998 553 ntBASIC5.43□□□□□ -1.54
USP41Q3LFD5 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.43□□□□□ -1.54
USP41Q3LFD5 AC040958.1-201ENST00000561102 201 ntBASIC5.43□□□□□ -1.54
USP41Q3LFD5 AC106785.3-201ENST00000564064 847 ntBASIC5.43□□□□□ -1.54
USP41Q3LFD5 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.43□□□□□ -1.54
USP41Q3LFD5 MIR3936-201ENST00000584304 110 ntBASIC5.43□□□□□ -1.54
USP41Q3LFD5 ZNF92P2-201ENST00000600543 1059 ntBASIC5.43□□□□□ -1.54
USP41Q3LFD5 AC135178.6-201ENST00000605314 398 ntBASIC5.43□□□□□ -1.54
USP41Q3LFD5 AC005021.1-201ENST00000608730 355 ntBASIC5.43□□□□□ -1.54
USP41Q3LFD5 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.43□□□□□ -1.54
USP41Q3LFD5 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.43□□□□□ -1.54
USP41Q3LFD5 AC132825.1-201ENST00000463573 2247 ntBASIC5.43□□□□□ -1.54
USP41Q3LFD5 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
USP41Q3LFD5 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.42□□□□□ -1.54
USP41Q3LFD5 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP41Q3LFD5 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.42□□□□□ -1.54
USP41Q3LFD5 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP41Q3LFD5 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.42□□□□□ -1.54
USP41Q3LFD5 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP41Q3LFD5 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
USP41Q3LFD5 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP41Q3LFD5 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
USP41Q3LFD5 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
USP41Q3LFD5 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
USP41Q3LFD5 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
USP41Q3LFD5 Z86062.1-201ENST00000406773 777 ntBASIC5.42□□□□□ -1.54
USP41Q3LFD5 AL353692.2-201ENST00000407054 335 ntBASIC5.42□□□□□ -1.54
USP41Q3LFD5 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.42□□□□□ -1.54
USP41Q3LFD5 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.42□□□□□ -1.54
USP41Q3LFD5 RPL26P29-201ENST00000415623 438 ntBASIC5.42□□□□□ -1.54
USP41Q3LFD5 NIPA2P1-201ENST00000426223 976 ntBASIC5.42□□□□□ -1.54
USP41Q3LFD5 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.42□□□□□ -1.54
USP41Q3LFD5 HSPD1P12-201ENST00000429127 1069 ntBASIC5.42□□□□□ -1.54
USP41Q3LFD5 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.42□□□□□ -1.54
USP41Q3LFD5 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.42□□□□□ -1.54
USP41Q3LFD5 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.42□□□□□ -1.54
USP41Q3LFD5 MTND2P6-201ENST00000455337 1030 ntBASIC5.42□□□□□ -1.54
USP41Q3LFD5 RN7SL814P-201ENST00000487715 300 ntBASIC5.42□□□□□ -1.54
USP41Q3LFD5 RPL23AP73-201ENST00000492507 471 ntBASIC5.42□□□□□ -1.54
USP41Q3LFD5 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.42□□□□□ -1.54
USP41Q3LFD5 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.42□□□□□ -1.54
USP41Q3LFD5 RN7SKP34-201ENST00000516142 244 ntBASIC5.42□□□□□ -1.54
USP41Q3LFD5 AC103833.1-201ENST00000517442 172 ntBASIC5.42□□□□□ -1.54
USP41Q3LFD5 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.42□□□□□ -1.54
USP41Q3LFD5 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms