Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
USF2Q15853 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
USF2Q15853 AC090229.1-201ENST00000590983 1609 ntBASIC4.1□□□□□ -1.75
USF2Q15853 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
USF2Q15853 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
USF2Q15853 AC027290.2-201ENST00000623210 18662 ntBASIC4.1□□□□□ -1.75
USF2Q15853 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
USF2Q15853 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
USF2Q15853 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.1□□□□□ -1.75
USF2Q15853 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
USF2Q15853 RN7SKP153-201ENST00000365026 316 ntBASIC4.1□□□□□ -1.75
USF2Q15853 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
USF2Q15853 GCNT6-201ENST00000379591 934 ntBASIC4.1□□□□□ -1.75
USF2Q15853 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
USF2Q15853 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.1□□□□□ -1.75
USF2Q15853 GABARAPL3-201ENST00000412799 354 ntBASIC4.1□□□□□ -1.75
USF2Q15853 TRIM60P17-201ENST00000415181 719 ntBASIC4.1□□□□□ -1.75
USF2Q15853 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.1□□□□□ -1.75
USF2Q15853 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
USF2Q15853 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.1□□□□□ -1.75
USF2Q15853 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.1□□□□□ -1.75
USF2Q15853 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.1□□□□□ -1.75
USF2Q15853 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.1□□□□□ -1.75
USF2Q15853 RPL36AP39-201ENST00000445859 318 ntBASIC4.1□□□□□ -1.75
USF2Q15853 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.1□□□□□ -1.75
USF2Q15853 RPL31P15-201ENST00000449770 338 ntBASIC4.1□□□□□ -1.75
USF2Q15853 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.1□□□□□ -1.75
USF2Q15853 AC007998.1-201ENST00000474156 672 ntBASIC4.1□□□□□ -1.75
USF2Q15853 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
USF2Q15853 RPL7P41-201ENST00000485823 957 ntBASIC4.1□□□□□ -1.75
USF2Q15853 AC104109.1-201ENST00000498563 436 ntBASIC4.1□□□□□ -1.75
USF2Q15853 NIFKP7-201ENST00000503365 834 ntBASIC4.1□□□□□ -1.75
USF2Q15853 IGLVIV-64-201ENST00000518581 301 ntBASIC4.1□□□□□ -1.75
USF2Q15853 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
USF2Q15853 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.1□□□□□ -1.75
USF2Q15853 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.1□□□□□ -1.75
USF2Q15853 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.1□□□□□ -1.75
USF2Q15853 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
USF2Q15853 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.1□□□□□ -1.75
USF2Q15853 AC022884.3-201ENST00000579571 248 ntBASIC4.1□□□□□ -1.75
USF2Q15853 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.1□□□□□ -1.75
USF2Q15853 MIR4505-201ENST00000582238 73 ntBASIC4.1□□□□□ -1.75
USF2Q15853 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.1□□□□□ -1.75
USF2Q15853 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.1□□□□□ -1.75
USF2Q15853 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.1□□□□□ -1.75
USF2Q15853 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.1□□□□□ -1.75
USF2Q15853 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
USF2Q15853 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
USF2Q15853 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.1□□□□□ -1.75
USF2Q15853 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
USF2Q15853 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
USF2Q15853 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
USF2Q15853 USP9YP4-201ENST00000424401 1745 ntBASIC4.09□□□□□ -1.75
USF2Q15853 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
USF2Q15853 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.09□□□□□ -1.75
USF2Q15853 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
USF2Q15853 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.09□□□□□ -1.75
USF2Q15853 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.09□□□□□ -1.75
USF2Q15853 MIR133B-201ENST00000362210 119 ntBASIC4.09□□□□□ -1.75
USF2Q15853 RNU6-1251P-201ENST00000364502 107 ntBASIC4.09□□□□□ -1.75
USF2Q15853 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
USF2Q15853 MIR589-201ENST00000385238 99 ntBASIC4.09□□□□□ -1.75
USF2Q15853 AL133388.1-201ENST00000404509 287 ntBASIC4.09□□□□□ -1.75
USF2Q15853 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.09□□□□□ -1.75
USF2Q15853 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
USF2Q15853 RPL23AP19-201ENST00000436229 369 ntBASIC4.09□□□□□ -1.75
USF2Q15853 AC064862.4-201ENST00000442180 334 ntBASIC4.09□□□□□ -1.75
USF2Q15853 GAPDHP25-201ENST00000447061 1001 ntBASIC4.09□□□□□ -1.75
USF2Q15853 NOP56P2-201ENST00000447491 769 ntBASIC4.09□□□□□ -1.75
USF2Q15853 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.09□□□□□ -1.75
USF2Q15853 RN7SL51P-201ENST00000468230 285 ntBASIC4.09□□□□□ -1.75
USF2Q15853 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.09□□□□□ -1.75
USF2Q15853 RN7SL423P-201ENST00000486202 304 ntBASIC4.09□□□□□ -1.75
USF2Q15853 RN7SL814P-201ENST00000487715 300 ntBASIC4.09□□□□□ -1.75
USF2Q15853 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.09□□□□□ -1.75
USF2Q15853 RPS6P4-201ENST00000494693 758 ntBASIC4.09□□□□□ -1.75
USF2Q15853 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.09□□□□□ -1.75
USF2Q15853 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.09□□□□□ -1.75
USF2Q15853 AC022826.1-201ENST00000519383 805 ntBASIC4.09□□□□□ -1.75
USF2Q15853 AC112191.2-201ENST00000522428 333 ntBASIC4.09□□□□□ -1.75
USF2Q15853 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.09□□□□□ -1.75
USF2Q15853 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.09□□□□□ -1.75
USF2Q15853 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.09□□□□□ -1.75
USF2Q15853 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
USF2Q15853 AC022884.2-201ENST00000578535 580 ntBASIC4.09□□□□□ -1.75
USF2Q15853 MIR1273E-201ENST00000581165 102 ntBASIC4.09□□□□□ -1.75
USF2Q15853 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.09□□□□□ -1.75
USF2Q15853 AC060766.1-201ENST00000590824 627 ntBASIC4.09□□□□□ -1.75
USF2Q15853 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.09□□□□□ -1.75
USF2Q15853 BMS1P7-201ENST00000602440 1052 ntBASIC4.09□□□□□ -1.75
USF2Q15853 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.09□□□□□ -1.75
USF2Q15853 AC000068.2-201ENST00000608816 460 ntBASIC4.09□□□□□ -1.75
USF2Q15853 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.09□□□□□ -1.75
USF2Q15853 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.09□□□□□ -1.75
USF2Q15853 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.09□□□□□ -1.75
USF2Q15853 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.09□□□□□ -1.75
USF2Q15853 MIR4302-201ENST00000638058 60 ntBASIC4.09□□□□□ -1.75
USF2Q15853 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
USF2Q15853 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
USF2Q15853 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms