Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ATF1P1-201ENST00000406040 927 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 RN7SKP199-201ENST00000410325 305 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.71□□□□□ -1.66
SCN1BQ07699 RPSAP35-201ENST00000413753 818 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SCN1BQ07699 AL022331.1-201ENST00000429025 477 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.71□□□□□ -1.66
SCN1BQ07699 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.71□□□□□ -1.66
SCN1BQ07699 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.71□□□□□ -1.66
SCN1BQ07699 IFNWP4-201ENST00000453148 294 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 AC010683.1-201ENST00000473673 378 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 AC011037.1-201ENST00000483964 558 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 RPL37P23-201ENST00000492641 294 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 RN7SL447P-201ENST00000494711 245 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.71□□□□□ -1.66
SCN1BQ07699 RNA5SP473-201ENST00000516402 125 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 HMGB1P19-201ENST00000517578 577 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 AC105031.1-201ENST00000518550 476 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.71□□□□□ -1.66
SCN1BQ07699 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.71□□□□□ -1.66
SCN1BQ07699 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.71□□□□□ -1.66
SCN1BQ07699 OR11H3P-201ENST00000554547 982 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 AC084757.1-201ENST00000559987 490 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.71□□□□□ -1.66
SCN1BQ07699 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.71□□□□□ -1.66
SCN1BQ07699 NF1P5-201ENST00000588287 448 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.71□□□□□ -1.66
SCN1BQ07699 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.71□□□□□ -1.66
SCN1BQ07699 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
SCN1BQ07699 MIR8069-1-201ENST00000616627 86 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 AC009704.2-201ENST00000618739 483 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 MIR8069-2-201ENST00000621412 86 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 AC097460.3-201ENST00000623099 442 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.71□□□□□ -1.66
SCN1BQ07699 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
SCN1BQ07699 MIR193BHG-214ENST00000641765 509 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 AC139713.2-215ENST00000641428 5037 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.71□□□□□ -1.66
SCN1BQ07699 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SCN1BQ07699 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SCN1BQ07699 AL137100.1-201ENST00000556703 1620 ntBASIC4.71□□□□□ -1.66
SCN1BQ07699 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.71□□□□□ -1.66
SCN1BQ07699 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SCN1BQ07699 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SCN1BQ07699 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SCN1BQ07699 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.71□□□□□ -1.66
SCN1BQ07699 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SCN1BQ07699 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SCN1BQ07699 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SCN1BQ07699 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SCN1BQ07699 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SCN1BQ07699 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SCN1BQ07699 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.7□□□□□ -1.66
SCN1BQ07699 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.7□□□□□ -1.66
SCN1BQ07699 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.7□□□□□ -1.66
SCN1BQ07699 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.7□□□□□ -1.66
SCN1BQ07699 AL512283.1-201ENST00000606756 1384 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
SCN1BQ07699 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SCN1BQ07699 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.7□□□□□ -1.66
SCN1BQ07699 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.7□□□□□ -1.66
SCN1BQ07699 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SCN1BQ07699 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SCN1BQ07699 Y_RNA.110-201ENST00000363220 99 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 RN7SKP28-201ENST00000364770 305 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 RNU4-2-201ENST00000365668 141 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SCN1BQ07699 PTGES3P2-201ENST00000407942 482 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 RNU4-27P-201ENST00000410889 139 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 AC073136.2-201ENST00000417282 849 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 AC234782.4-201ENST00000417646 1048 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 AL358176.3-201ENST00000420757 454 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.7□□□□□ -1.66
SCN1BQ07699 AL512661.1-201ENST00000434586 1253 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SCN1BQ07699 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.7□□□□□ -1.66
SCN1BQ07699 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.7□□□□□ -1.66
SCN1BQ07699 CYCSP53-201ENST00000455540 265 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 AC011225.1-201ENST00000457751 369 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 CYCSP34-201ENST00000458172 304 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 AC112206.1-201ENST00000468416 477 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.7□□□□□ -1.66
SCN1BQ07699 RPL15P21-201ENST00000495592 567 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.7□□□□□ -1.66
SCN1BQ07699 PGBD4P4-201ENST00000509673 613 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.7□□□□□ -1.66
SCN1BQ07699 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.7□□□□□ -1.66
SCN1BQ07699 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.7□□□□□ -1.66
SCN1BQ07699 TRIM77BP-201ENST00000524985 1119 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.7□□□□□ -1.66
SCN1BQ07699 AP000648.1-201ENST00000529682 397 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SCN1BQ07699 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.7□□□□□ -1.66
SCN1BQ07699 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.7□□□□□ -1.66
SCN1BQ07699 HSPE1P2-201ENST00000554777 306 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.7□□□□□ -1.66
SCN1BQ07699 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.7□□□□□ -1.66
SCN1BQ07699 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms