Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 HMGB3P22-202ENST00000451823 572 ntBASIC4.93□□□□□ -1.62
CBX1P83916 LRRC37A14P-201ENST00000452297 462 ntBASIC4.93□□□□□ -1.62
CBX1P83916 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.93□□□□□ -1.62
CBX1P83916 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CBX1P83916 AC008897.1-201ENST00000494006 347 ntBASIC4.93□□□□□ -1.62
CBX1P83916 RBBP4P1-201ENST00000502424 1276 ntBASIC4.93□□□□□ -1.62
CBX1P83916 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.93□□□□□ -1.62
CBX1P83916 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CBX1P83916 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.93□□□□□ -1.62
CBX1P83916 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.93□□□□□ -1.62
CBX1P83916 Y_RNA.667-201ENST00000516212 107 ntBASIC4.93□□□□□ -1.62
CBX1P83916 MIR2114-201ENST00000516645 80 ntBASIC4.93□□□□□ -1.62
CBX1P83916 AP000648.1-201ENST00000529682 397 ntBASIC4.93□□□□□ -1.62
CBX1P83916 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CBX1P83916 AP006289.1-201ENST00000538089 277 ntBASIC4.93□□□□□ -1.62
CBX1P83916 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.93□□□□□ -1.62
CBX1P83916 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.93□□□□□ -1.62
CBX1P83916 FKBP1BP1-201ENST00000553366 325 ntBASIC4.93□□□□□ -1.62
CBX1P83916 AL049874.4-201ENST00000557593 255 ntBASIC4.93□□□□□ -1.62
CBX1P83916 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.93□□□□□ -1.62
CBX1P83916 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.93□□□□□ -1.62
CBX1P83916 AC015802.2-201ENST00000589690 189 ntBASIC4.93□□□□□ -1.62
CBX1P83916 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.93□□□□□ -1.62
CBX1P83916 AC025946.2-201ENST00000603398 234 ntBASIC4.93□□□□□ -1.62
CBX1P83916 HMGB1P50-201ENST00000605814 607 ntBASIC4.93□□□□□ -1.62
CBX1P83916 AL138721.1-201ENST00000616756 179 ntBASIC4.93□□□□□ -1.62
CBX1P83916 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.93□□□□□ -1.62
CBX1P83916 AC006453.5-201ENST00000636451 619 ntBASIC4.93□□□□□ -1.62
CBX1P83916 AC008691.1-209ENST00000642094 814 ntBASIC4.93□□□□□ -1.62
CBX1P83916 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CBX1P83916 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.93□□□□□ -1.62
CBX1P83916 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.93□□□□□ -1.62
CBX1P83916 AC104966.1-201ENST00000467010 1464 ntBASIC4.93□□□□□ -1.62
CBX1P83916 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CBX1P83916 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CBX1P83916 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.92□□□□□ -1.62
CBX1P83916 AC092747.4-201ENST00000620519 1861 ntBASIC4.92□□□□□ -1.62
CBX1P83916 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CBX1P83916 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CBX1P83916 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.92□□□□□ -1.62
CBX1P83916 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CBX1P83916 ARL4AP5-201ENST00000404372 599 ntBASIC4.92□□□□□ -1.62
CBX1P83916 MIR1203-201ENST00000408812 85 ntBASIC4.92□□□□□ -1.62
CBX1P83916 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.92□□□□□ -1.62
CBX1P83916 MTND4LP13-201ENST00000425022 298 ntBASIC4.92□□□□□ -1.62
CBX1P83916 AC127526.2-201ENST00000426436 775 ntBASIC4.92□□□□□ -1.62
CBX1P83916 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.92□□□□□ -1.62
CBX1P83916 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.92□□□□□ -1.62
CBX1P83916 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.92□□□□□ -1.62
CBX1P83916 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.92□□□□□ -1.62
CBX1P83916 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CBX1P83916 RPL31P53-201ENST00000457065 348 ntBASIC4.92□□□□□ -1.62
CBX1P83916 AC079804.1-201ENST00000461922 436 ntBASIC4.92□□□□□ -1.62
CBX1P83916 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.92□□□□□ -1.62
CBX1P83916 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.92□□□□□ -1.62
CBX1P83916 AK4P6-201ENST00000505168 528 ntBASIC4.92□□□□□ -1.62
CBX1P83916 IGHV3-63-201ENST00000518422 341 ntBASIC4.92□□□□□ -1.62
CBX1P83916 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.92□□□□□ -1.62
CBX1P83916 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.92□□□□□ -1.62
CBX1P83916 CD24P2-201ENST00000565486 219 ntBASIC4.92□□□□□ -1.62
CBX1P83916 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.92□□□□□ -1.62
CBX1P83916 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CBX1P83916 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CBX1P83916 GMCL1P2-201ENST00000605230 823 ntBASIC4.92□□□□□ -1.62
CBX1P83916 PPATP2-201ENST00000605635 508 ntBASIC4.92□□□□□ -1.62
CBX1P83916 AC012603.1-201ENST00000606424 528 ntBASIC4.92□□□□□ -1.62
CBX1P83916 AC012213.4-201ENST00000606457 354 ntBASIC4.92□□□□□ -1.62
CBX1P83916 AC009779.8-202ENST00000607990 932 ntBASIC4.92□□□□□ -1.62
CBX1P83916 AP001437.1-201ENST00000608783 456 ntBASIC4.92□□□□□ -1.62
CBX1P83916 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CBX1P83916 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.92□□□□□ -1.62
CBX1P83916 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CBX1P83916 AC093535.2-201ENST00000624769 2326 ntBASIC4.92□□□□□ -1.62
CBX1P83916 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CBX1P83916 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CBX1P83916 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CBX1P83916 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CBX1P83916 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CBX1P83916 VPS35P1-201ENST00000563400 1518 ntBASIC4.92□□□□□ -1.62
CBX1P83916 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.92□□□□□ -1.62
CBX1P83916 AC017007.4-201ENST00000503353 1352 ntBASIC4.91□□□□□ -1.62
CBX1P83916 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.91□□□□□ -1.62
CBX1P83916 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CBX1P83916 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.91□□□□□ -1.62
CBX1P83916 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CBX1P83916 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CBX1P83916 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CBX1P83916 AC010132.2-201ENST00000295493 1043 ntBASIC4.91□□□□□ -1.62
CBX1P83916 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.91□□□□□ -1.62
CBX1P83916 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CBX1P83916 RNU6-984P-201ENST00000363236 109 ntBASIC4.91□□□□□ -1.62
CBX1P83916 RNA5SP151-201ENST00000365632 117 ntBASIC4.91□□□□□ -1.62
CBX1P83916 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.91□□□□□ -1.62
CBX1P83916 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CBX1P83916 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
CBX1P83916 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.91□□□□□ -1.62
CBX1P83916 JKAMPP1-201ENST00000413804 919 ntBASIC4.91□□□□□ -1.62
CBX1P83916 TRIM60P17-201ENST00000415181 719 ntBASIC4.91□□□□□ -1.62
CBX1P83916 CENPIP1-201ENST00000425713 902 ntBASIC4.91□□□□□ -1.62
CBX1P83916 PSMD10P3-201ENST00000437000 448 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms