Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RNU1-20P-201ENST00000363314 162 ntBASIC4.2□□□□□ -1.74
UBA52P62987 RNA5SP455-201ENST00000365190 119 ntBASIC4.2□□□□□ -1.74
UBA52P62987 RNA5SP87-201ENST00000384155 118 ntBASIC4.2□□□□□ -1.74
UBA52P62987 MIR192-201ENST00000384915 110 ntBASIC4.2□□□□□ -1.74
UBA52P62987 GAPDHP15-201ENST00000398586 975 ntBASIC4.2□□□□□ -1.74
UBA52P62987 NUDT19P3-201ENST00000404698 555 ntBASIC4.2□□□□□ -1.74
UBA52P62987 RAB28P1-201ENST00000411517 641 ntBASIC4.2□□□□□ -1.74
UBA52P62987 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
UBA52P62987 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.2□□□□□ -1.74
UBA52P62987 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC4.2□□□□□ -1.74
UBA52P62987 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.2□□□□□ -1.74
UBA52P62987 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.2□□□□□ -1.74
UBA52P62987 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.2□□□□□ -1.74
UBA52P62987 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.2□□□□□ -1.74
UBA52P62987 NDUFA5P8-201ENST00000449019 346 ntBASIC4.2□□□□□ -1.74
UBA52P62987 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.2□□□□□ -1.74
UBA52P62987 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.2□□□□□ -1.74
UBA52P62987 RPS29P33-201ENST00000456717 146 ntBASIC4.2□□□□□ -1.74
UBA52P62987 RN7SL41P-201ENST00000476144 297 ntBASIC4.2□□□□□ -1.74
UBA52P62987 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.2□□□□□ -1.74
UBA52P62987 RPS4XP18-201ENST00000495480 763 ntBASIC4.2□□□□□ -1.74
UBA52P62987 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.2□□□□□ -1.74
UBA52P62987 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.2□□□□□ -1.74
UBA52P62987 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.2□□□□□ -1.74
UBA52P62987 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.2□□□□□ -1.74
UBA52P62987 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.2□□□□□ -1.74
UBA52P62987 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.2□□□□□ -1.74
UBA52P62987 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
UBA52P62987 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.2□□□□□ -1.74
UBA52P62987 AC079075.1-201ENST00000559543 878 ntBASIC4.2□□□□□ -1.74
UBA52P62987 AC116553.2-201ENST00000564203 463 ntBASIC4.2□□□□□ -1.74
UBA52P62987 AL162431.4-201ENST00000604674 411 ntBASIC4.2□□□□□ -1.74
UBA52P62987 AC087385.3-201ENST00000620477 187 ntBASIC4.2□□□□□ -1.74
UBA52P62987 AC004232.3-201ENST00000622977 525 ntBASIC4.2□□□□□ -1.74
UBA52P62987 AC005086.4-201ENST00000623065 213 ntBASIC4.2□□□□□ -1.74
UBA52P62987 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
UBA52P62987 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.2□□□□□ -1.74
UBA52P62987 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.2□□□□□ -1.74
UBA52P62987 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
UBA52P62987 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
UBA52P62987 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.2□□□□□ -1.74
UBA52P62987 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.2□□□□□ -1.74
UBA52P62987 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
UBA52P62987 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.19□□□□□ -1.74
UBA52P62987 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.19□□□□□ -1.74
UBA52P62987 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.19□□□□□ -1.74
UBA52P62987 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.19□□□□□ -1.74
UBA52P62987 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
UBA52P62987 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
UBA52P62987 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
UBA52P62987 IRF5P1-201ENST00000504852 2164 ntBASIC4.19□□□□□ -1.74
UBA52P62987 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.19□□□□□ -1.74
UBA52P62987 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
UBA52P62987 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
UBA52P62987 U3.3-201ENST00000362986 216 ntBASIC4.19□□□□□ -1.74
UBA52P62987 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
UBA52P62987 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.19□□□□□ -1.74
UBA52P62987 RPS4XP9-201ENST00000405151 780 ntBASIC4.19□□□□□ -1.74
UBA52P62987 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.19□□□□□ -1.74
UBA52P62987 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.19□□□□□ -1.74
UBA52P62987 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.19□□□□□ -1.74
UBA52P62987 OR2AM1P-201ENST00000422137 422 ntBASIC4.19□□□□□ -1.74
UBA52P62987 EIF4HP2-201ENST00000424380 563 ntBASIC4.19□□□□□ -1.74
UBA52P62987 COX6CP13-201ENST00000428703 226 ntBASIC4.19□□□□□ -1.74
UBA52P62987 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.19□□□□□ -1.74
UBA52P62987 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.19□□□□□ -1.74
UBA52P62987 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
UBA52P62987 AC069285.2-201ENST00000440210 275 ntBASIC4.19□□□□□ -1.74
UBA52P62987 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.19□□□□□ -1.74
UBA52P62987 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.19□□□□□ -1.74
UBA52P62987 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.19□□□□□ -1.74
UBA52P62987 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.19□□□□□ -1.74
UBA52P62987 AC093267.1-201ENST00000489176 961 ntBASIC4.19□□□□□ -1.74
UBA52P62987 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.19□□□□□ -1.74
UBA52P62987 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.19□□□□□ -1.74
UBA52P62987 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.19□□□□□ -1.74
UBA52P62987 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.19□□□□□ -1.74
UBA52P62987 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
UBA52P62987 AL008729.2-201ENST00000606393 473 ntBASIC4.19□□□□□ -1.74
UBA52P62987 AC012557.1-201ENST00000607115 611 ntBASIC4.19□□□□□ -1.74
UBA52P62987 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.19□□□□□ -1.74
UBA52P62987 MIR378J-201ENST00000611988 109 ntBASIC4.19□□□□□ -1.74
UBA52P62987 AL356752.1-201ENST00000615844 593 ntBASIC4.19□□□□□ -1.74
UBA52P62987 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.19□□□□□ -1.74
UBA52P62987 AC135068.12-201ENST00000637370 931 ntBASIC4.19□□□□□ -1.74
UBA52P62987 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
UBA52P62987 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
UBA52P62987 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.19□□□□□ -1.74
UBA52P62987 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
UBA52P62987 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.19□□□□□ -1.74
UBA52P62987 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
UBA52P62987 DDX18P5-201ENST00000534547 1306 ntBASIC4.19□□□□□ -1.74
UBA52P62987 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
UBA52P62987 NXF4-202ENST00000416098 1465 ntBASIC4.18□□□□□ -1.74
UBA52P62987 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
UBA52P62987 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
UBA52P62987 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.18□□□□□ -1.74
UBA52P62987 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
UBA52P62987 AC087190.4-201ENST00000574616 8334 ntBASIC4.18□□□□□ -1.74
UBA52P62987 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms