Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC3.17□□□□□ -1.9
RPL39P62891 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.17□□□□□ -1.9
RPL39P62891 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.17□□□□□ -1.9
RPL39P62891 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RPL39P62891 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC3.17□□□□□ -1.9
RPL39P62891 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RPL39P62891 SNORA17.5-201ENST00000630429 132 ntBASIC3.17□□□□□ -1.9
RPL39P62891 MIR1910-201ENST00000636955 80 ntBASIC3.17□□□□□ -1.9
RPL39P62891 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RPL39P62891 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC3.17□□□□□ -1.9
RPL39P62891 MTCO1P7-201ENST00000419523 1542 ntBASIC3.17□□□□□ -1.9
RPL39P62891 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.17□□□□□ -1.9
RPL39P62891 AL078595.2-201ENST00000605309 1780 ntBASIC3.17□□□□□ -1.9
RPL39P62891 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
RPL39P62891 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RPL39P62891 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RPL39P62891 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RPL39P62891 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC3.17□□□□□ -1.9
RPL39P62891 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.17□□□□□ -1.9
RPL39P62891 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RPL39P62891 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
RPL39P62891 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
RPL39P62891 MTND4P26-201ENST00000415971 1359 ntBASIC3.16□□□□□ -1.9
RPL39P62891 BTBD10P1-201ENST00000549824 1352 ntBASIC3.16□□□□□ -1.9
RPL39P62891 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.16□□□□□ -1.9
RPL39P62891 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RPL39P62891 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
RPL39P62891 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RPL39P62891 RN7SKP162-201ENST00000363605 345 ntBASIC3.16□□□□□ -1.9
RPL39P62891 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RPL39P62891 LAP3P1-201ENST00000403648 294 ntBASIC3.16□□□□□ -1.9
RPL39P62891 RPS23P10-201ENST00000416185 486 ntBASIC3.16□□□□□ -1.9
RPL39P62891 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.16□□□□□ -1.9
RPL39P62891 AC079807.1-201ENST00000429993 481 ntBASIC3.16□□□□□ -1.9
RPL39P62891 AC112498.1-201ENST00000444401 332 ntBASIC3.16□□□□□ -1.9
RPL39P62891 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.16□□□□□ -1.9
RPL39P62891 AC108463.1-201ENST00000450258 347 ntBASIC3.16□□□□□ -1.9
RPL39P62891 AL645937.3-201ENST00000453647 936 ntBASIC3.16□□□□□ -1.9
RPL39P62891 DDX39BP2-208ENST00000453923 258 ntBASIC3.16□□□□□ -1.9
RPL39P62891 RPS5P7-201ENST00000456664 608 ntBASIC3.16□□□□□ -1.9
RPL39P62891 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC3.16□□□□□ -1.9
RPL39P62891 RN7SL172P-201ENST00000460535 303 ntBASIC3.16□□□□□ -1.9
RPL39P62891 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC3.16□□□□□ -1.9
RPL39P62891 RN7SL741P-201ENST00000482473 289 ntBASIC3.16□□□□□ -1.9
RPL39P62891 OR51K1P-201ENST00000510214 950 ntBASIC3.16□□□□□ -1.9
RPL39P62891 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.16□□□□□ -1.9
RPL39P62891 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.16□□□□□ -1.9
RPL39P62891 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC3.16□□□□□ -1.9
RPL39P62891 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC3.16□□□□□ -1.9
RPL39P62891 GCSHP4-201ENST00000538792 439 ntBASIC3.16□□□□□ -1.9
RPL39P62891 RBM7-208ENST00000545678 867 ntTSL 3 BASIC3.16□□□□□ -1.9
RPL39P62891 AC004825.1-201ENST00000555068 586 ntBASIC3.16□□□□□ -1.9
RPL39P62891 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC3.16□□□□□ -1.9
RPL39P62891 RN7SL652P-201ENST00000577769 300 ntBASIC3.16□□□□□ -1.9
RPL39P62891 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.16□□□□□ -1.9
RPL39P62891 RPL27-207ENST00000590864 569 ntTSL 2 BASIC3.16□□□□□ -1.9
RPL39P62891 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.16□□□□□ -1.9
RPL39P62891 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC3.16□□□□□ -1.9
RPL39P62891 AL391358.1-201ENST00000605342 190 ntBASIC3.16□□□□□ -1.9
RPL39P62891 Z98200.1-201ENST00000607298 470 ntBASIC3.16□□□□□ -1.9
RPL39P62891 EIF3FP1-201ENST00000613970 806 ntBASIC3.16□□□□□ -1.9
RPL39P62891 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RPL39P62891 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.16□□□□□ -1.9
RPL39P62891 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC3.16□□□□□ -1.9
RPL39P62891 AC007546.2-201ENST00000623996 360 ntBASIC3.16□□□□□ -1.9
RPL39P62891 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC3.16□□□□□ -1.9
RPL39P62891 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.16□□□□□ -1.9
RPL39P62891 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RPL39P62891 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.16□□□□□ -1.9
RPL39P62891 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RPL39P62891 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RPL39P62891 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
RPL39P62891 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RPL39P62891 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RPL39P62891 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RPL39P62891 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RPL39P62891 ZNF962P-201ENST00000443465 3140 ntBASIC3.15□□□□□ -1.9
RPL39P62891 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
RPL39P62891 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
RPL39P62891 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
RPL39P62891 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RPL39P62891 RPL23P2-201ENST00000320371 421 ntBASIC3.15□□□□□ -1.91
RPL39P62891 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RPL39P62891 MIR143-201ENST00000385300 106 ntBASIC3.15□□□□□ -1.91
RPL39P62891 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC3.15□□□□□ -1.91
RPL39P62891 Z98745.1-201ENST00000402553 494 ntBASIC3.15□□□□□ -1.91
RPL39P62891 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.15□□□□□ -1.91
RPL39P62891 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.15□□□□□ -1.91
RPL39P62891 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC3.15□□□□□ -1.91
RPL39P62891 AL353748.1-201ENST00000440753 474 ntBASIC3.15□□□□□ -1.91
RPL39P62891 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC3.15□□□□□ -1.91
RPL39P62891 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC3.15□□□□□ -1.91
RPL39P62891 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.15□□□□□ -1.91
RPL39P62891 AC104763.1-201ENST00000475274 360 ntBASIC3.15□□□□□ -1.91
RPL39P62891 BX284632.1-201ENST00000478218 541 ntBASIC3.15□□□□□ -1.91
RPL39P62891 RPL36AP41-201ENST00000493820 306 ntBASIC3.15□□□□□ -1.91
RPL39P62891 RPL37AP8-201ENST00000494116 276 ntBASIC3.15□□□□□ -1.91
RPL39P62891 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RPL39P62891 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC3.15□□□□□ -1.91
RPL39P62891 RN7SKP70-201ENST00000516655 271 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms