Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDH11P55287 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH11P55287 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH11P55287 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH11P55287 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH11P55287 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH11P55287 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.74□□□□□ -1.65
CDH11P55287 AC006210.2-201ENST00000367074 1545 ntBASIC4.74□□□□□ -1.65
CDH11P55287 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH11P55287 RNA5SP335-201ENST00000363817 110 ntBASIC4.74□□□□□ -1.65
CDH11P55287 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH11P55287 AL034403.1-201ENST00000399414 885 ntBASIC4.74□□□□□ -1.65
CDH11P55287 TAF9BP2-201ENST00000400856 499 ntBASIC4.74□□□□□ -1.65
CDH11P55287 HSPA8P15-201ENST00000401676 786 ntBASIC4.74□□□□□ -1.65
CDH11P55287 RN7SKP16-201ENST00000410180 299 ntBASIC4.74□□□□□ -1.65
CDH11P55287 RNU4-27P-201ENST00000410889 139 ntBASIC4.74□□□□□ -1.65
CDH11P55287 RPL26P37-201ENST00000411983 438 ntBASIC4.74□□□□□ -1.65
CDH11P55287 AL158050.1-201ENST00000416077 457 ntBASIC4.74□□□□□ -1.65
CDH11P55287 RPS26P13-201ENST00000419030 330 ntBASIC4.74□□□□□ -1.65
CDH11P55287 RPA2P2-201ENST00000419698 796 ntBASIC4.74□□□□□ -1.65
CDH11P55287 AC093084.1-201ENST00000424233 687 ntBASIC4.74□□□□□ -1.65
CDH11P55287 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH11P55287 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.74□□□□□ -1.65
CDH11P55287 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH11P55287 AL353898.1-201ENST00000444055 238 ntBASIC4.74□□□□□ -1.65
CDH11P55287 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.74□□□□□ -1.65
CDH11P55287 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.74□□□□□ -1.65
CDH11P55287 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.74□□□□□ -1.65
CDH11P55287 HMGN1P5-201ENST00000448591 263 ntBASIC4.74□□□□□ -1.65
CDH11P55287 FAR2P1-206ENST00000449736 709 ntBASIC4.74□□□□□ -1.65
CDH11P55287 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH11P55287 FCF1P6-201ENST00000456841 595 ntBASIC4.74□□□□□ -1.65
CDH11P55287 RN7SL189P-201ENST00000468631 289 ntBASIC4.74□□□□□ -1.65
CDH11P55287 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH11P55287 AC008410.1-201ENST00000483777 339 ntBASIC4.74□□□□□ -1.65
CDH11P55287 AC058823.1-201ENST00000485315 474 ntBASIC4.74□□□□□ -1.65
CDH11P55287 RN7SL423P-201ENST00000486202 304 ntBASIC4.74□□□□□ -1.65
CDH11P55287 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.74□□□□□ -1.65
CDH11P55287 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.74□□□□□ -1.65
CDH11P55287 AL671862.1-201ENST00000515851 349 ntBASIC4.74□□□□□ -1.65
CDH11P55287 RN7SKP157-201ENST00000516174 282 ntBASIC4.74□□□□□ -1.65
CDH11P55287 RNA5SP92-201ENST00000516437 110 ntBASIC4.74□□□□□ -1.65
CDH11P55287 RNU6-334P-201ENST00000517072 102 ntBASIC4.74□□□□□ -1.65
CDH11P55287 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH11P55287 HAUS8P1-201ENST00000549005 542 ntBASIC4.74□□□□□ -1.65
CDH11P55287 BLZF2P-201ENST00000553776 1130 ntBASIC4.74□□□□□ -1.65
CDH11P55287 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH11P55287 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.74□□□□□ -1.65
CDH11P55287 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.74□□□□□ -1.65
CDH11P55287 AC104072.1-201ENST00000568817 668 ntBASIC4.74□□□□□ -1.65
CDH11P55287 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDH11P55287 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDH11P55287 AC011840.5-201ENST00000582125 771 ntBASIC4.74□□□□□ -1.65
CDH11P55287 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH11P55287 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDH11P55287 MTATP6P2-201ENST00000603319 678 ntBASIC4.74□□□□□ -1.65
CDH11P55287 AP001033.2-201ENST00000609701 1003 ntBASIC4.74□□□□□ -1.65
CDH11P55287 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDH11P55287 BX005214.3-202ENST00000619809 325 ntBASIC4.74□□□□□ -1.65
CDH11P55287 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.74□□□□□ -1.65
CDH11P55287 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH11P55287 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH11P55287 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH11P55287 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.74□□□□□ -1.65
CDH11P55287 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.74□□□□□ -1.65
CDH11P55287 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH11P55287 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH11P55287 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDH11P55287 AC000374.1-201ENST00000434698 1745 ntBASIC4.74□□□□□ -1.65
CDH11P55287 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH11P55287 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH11P55287 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CDH11P55287 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CDH11P55287 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH11P55287 AC025574.1-201ENST00000554784 1653 ntBASIC4.73□□□□□ -1.65
CDH11P55287 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDH11P55287 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDH11P55287 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.73□□□□□ -1.65
CDH11P55287 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDH11P55287 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDH11P55287 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CDH11P55287 SPATA2P1-201ENST00000431223 2055 ntBASIC4.73□□□□□ -1.65
CDH11P55287 AC007382.1-201ENST00000624376 2618 ntBASIC4.73□□□□□ -1.65
CDH11P55287 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.73□□□□□ -1.65
CDH11P55287 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDH11P55287 RNU6-252P-201ENST00000363232 107 ntBASIC4.73□□□□□ -1.65
CDH11P55287 SNORA16A-201ENST00000384342 137 ntBASIC4.73□□□□□ -1.65
CDH11P55287 SNORA70-201ENST00000384436 135 ntBASIC4.73□□□□□ -1.65
CDH11P55287 MIR620-201ENST00000385232 95 ntBASIC4.73□□□□□ -1.65
CDH11P55287 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH11P55287 SPTLC1P2-201ENST00000407089 121 ntBASIC4.73□□□□□ -1.65
CDH11P55287 DPPA2P3-201ENST00000411853 655 ntBASIC4.73□□□□□ -1.65
CDH11P55287 AL390774.1-201ENST00000411924 246 ntBASIC4.73□□□□□ -1.65
CDH11P55287 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.73□□□□□ -1.65
CDH11P55287 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH11P55287 AC006065.1-201ENST00000422539 802 ntBASIC4.73□□□□□ -1.65
CDH11P55287 SRSF1P1-201ENST00000424058 520 ntBASIC4.73□□□□□ -1.65
CDH11P55287 PRUNEP1-201ENST00000425846 705 ntBASIC4.73□□□□□ -1.65
CDH11P55287 AL139148.1-201ENST00000427122 680 ntBASIC4.73□□□□□ -1.65
CDH11P55287 NANOGP4-201ENST00000427230 913 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms