Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH6P55285 ARL4AP5-201ENST00000404372 599 ntBASIC4.96□□□□□ -1.62
CDH6P55285 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH6P55285 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH6P55285 AC096644.3-201ENST00000416788 338 ntBASIC4.96□□□□□ -1.62
CDH6P55285 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH6P55285 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH6P55285 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH6P55285 SERPINA7P1-201ENST00000443077 631 ntBASIC4.96□□□□□ -1.62
CDH6P55285 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH6P55285 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH6P55285 AURKAPS2-201ENST00000454983 333 ntBASIC4.96□□□□□ -1.62
CDH6P55285 RNU6-599P-201ENST00000459383 107 ntBASIC4.96□□□□□ -1.62
CDH6P55285 RNU6-1193P-201ENST00000459461 107 ntBASIC4.96□□□□□ -1.62
CDH6P55285 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH6P55285 AC073358.1-201ENST00000505671 684 ntBASIC4.96□□□□□ -1.62
CDH6P55285 AC138938.1-201ENST00000515431 782 ntBASIC4.96□□□□□ -1.62
CDH6P55285 BUD31P1-201ENST00000521828 359 ntBASIC4.96□□□□□ -1.62
CDH6P55285 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH6P55285 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH6P55285 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH6P55285 MIR5699-201ENST00000578903 90 ntBASIC4.96□□□□□ -1.62
CDH6P55285 MIR3936-201ENST00000584304 110 ntBASIC4.96□□□□□ -1.62
CDH6P55285 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.96□□□□□ -1.62
CDH6P55285 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH6P55285 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH6P55285 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH6P55285 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH6P55285 FAM27B-201ENST00000610601 213 ntBASIC4.96□□□□□ -1.62
CDH6P55285 RNU6-368P-201ENST00000620928 107 ntBASIC4.96□□□□□ -1.62
CDH6P55285 RNU6-538P-201ENST00000622329 107 ntBASIC4.96□□□□□ -1.62
CDH6P55285 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CDH6P55285 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.96□□□□□ -1.62
CDH6P55285 CASC19-222ENST00000641321 1173 ntBASIC4.96□□□□□ -1.62
CDH6P55285 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH6P55285 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDH6P55285 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH6P55285 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CDH6P55285 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH6P55285 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CDH6P55285 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH6P55285 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH6P55285 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH6P55285 DHX9P1-201ENST00000436565 3076 ntBASIC4.95□□□□□ -1.62
CDH6P55285 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH6P55285 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH6P55285 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH6P55285 AC107021.2-201ENST00000567714 2095 ntBASIC4.95□□□□□ -1.62
CDH6P55285 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH6P55285 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH6P55285 AL136164.3-201ENST00000624429 3978 ntBASIC4.95□□□□□ -1.62
CDH6P55285 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH6P55285 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH6P55285 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CDH6P55285 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH6P55285 COX6B1P1-201ENST00000415962 213 ntBASIC4.95□□□□□ -1.62
CDH6P55285 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH6P55285 EIF4A1P1-201ENST00000420241 934 ntBASIC4.95□□□□□ -1.62
CDH6P55285 AL645608.4-201ENST00000423619 154 ntBASIC4.95□□□□□ -1.62
CDH6P55285 VN1R54P-201ENST00000435210 1049 ntBASIC4.95□□□□□ -1.62
CDH6P55285 PSMD10P3-201ENST00000437000 448 ntBASIC4.95□□□□□ -1.62
CDH6P55285 SUMO2P1-206ENST00000445436 284 ntBASIC4.95□□□□□ -1.62
CDH6P55285 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH6P55285 CYCSP34-201ENST00000458172 304 ntBASIC4.95□□□□□ -1.62
CDH6P55285 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH6P55285 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH6P55285 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH6P55285 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH6P55285 AC021006.3-201ENST00000530771 192 ntBASIC4.95□□□□□ -1.62
CDH6P55285 AC005000.1-201ENST00000536192 288 ntBASIC4.95□□□□□ -1.62
CDH6P55285 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH6P55285 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CDH6P55285 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH6P55285 AL121950.1-201ENST00000624993 2077 ntBASIC4.95□□□□□ -1.62
CDH6P55285 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH6P55285 NCLP2-201ENST00000416078 1462 ntBASIC4.94□□□□□ -1.62
CDH6P55285 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH6P55285 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH6P55285 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH6P55285 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
CDH6P55285 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CDH6P55285 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CDH6P55285 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CDH6P55285 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH6P55285 RNU1-83P-201ENST00000363426 164 ntBASIC4.94□□□□□ -1.62
CDH6P55285 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH6P55285 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH6P55285 SNORA51.8-201ENST00000384234 132 ntBASIC4.94□□□□□ -1.62
CDH6P55285 RNU1-82P-201ENST00000390851 165 ntBASIC4.94□□□□□ -1.62
CDH6P55285 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.94□□□□□ -1.62
CDH6P55285 AL109941.1-201ENST00000401925 229 ntBASIC4.94□□□□□ -1.62
CDH6P55285 AL080315.1-201ENST00000406055 466 ntBASIC4.94□□□□□ -1.62
CDH6P55285 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH6P55285 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH6P55285 AC007559.1-201ENST00000428736 355 ntBASIC4.94□□□□□ -1.62
CDH6P55285 OR2B7P-201ENST00000429302 934 ntBASIC4.94□□□□□ -1.62
CDH6P55285 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH6P55285 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH6P55285 OR52J1P-201ENST00000450596 932 ntBASIC4.94□□□□□ -1.62
CDH6P55285 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms