Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.76□□□□□ -1.49
NEK3P51956 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
NEK3P51956 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
NEK3P51956 SNORA70.6-201ENST00000383934 134 ntBASIC5.76□□□□□ -1.49
NEK3P51956 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
NEK3P51956 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.76□□□□□ -1.49
NEK3P51956 RNU2-6P-201ENST00000411404 190 ntBASIC5.76□□□□□ -1.49
NEK3P51956 AC211486.3-201ENST00000412694 621 ntBASIC5.76□□□□□ -1.49
NEK3P51956 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.76□□□□□ -1.49
NEK3P51956 AL353597.2-202ENST00000434901 373 ntBASIC5.76□□□□□ -1.49
NEK3P51956 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.76□□□□□ -1.49
NEK3P51956 AC004854.1-201ENST00000440356 349 ntBASIC5.76□□□□□ -1.49
NEK3P51956 AL929288.2-201ENST00000446368 407 ntBASIC5.76□□□□□ -1.49
NEK3P51956 AL591363.1-201ENST00000450091 483 ntBASIC5.76□□□□□ -1.49
NEK3P51956 DNAJC19P8-201ENST00000452887 259 ntBASIC5.76□□□□□ -1.49
NEK3P51956 SNORD125-201ENST00000459538 96 ntBASIC5.76□□□□□ -1.49
NEK3P51956 AC087672.1-201ENST00000479876 766 ntBASIC5.76□□□□□ -1.49
NEK3P51956 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.76□□□□□ -1.49
NEK3P51956 RN7SL466P-201ENST00000497546 295 ntBASIC5.76□□□□□ -1.49
NEK3P51956 UBE2V1P12-201ENST00000503954 474 ntBASIC5.76□□□□□ -1.49
NEK3P51956 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.76□□□□□ -1.49
NEK3P51956 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.76□□□□□ -1.49
NEK3P51956 AC098799.3-201ENST00000506095 438 ntBASIC5.76□□□□□ -1.49
NEK3P51956 AC096571.1-202ENST00000506634 735 ntBASIC5.76□□□□□ -1.49
NEK3P51956 AC008837.1-201ENST00000511513 412 ntBASIC5.76□□□□□ -1.49
NEK3P51956 RPL7L1P4-201ENST00000513004 707 ntBASIC5.76□□□□□ -1.49
NEK3P51956 RNA5SP362-201ENST00000516048 118 ntBASIC5.76□□□□□ -1.49
NEK3P51956 RNA5SP228-201ENST00000516232 133 ntBASIC5.76□□□□□ -1.49
NEK3P51956 SEPT10P1-201ENST00000517342 1162 ntBASIC5.76□□□□□ -1.49
NEK3P51956 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.76□□□□□ -1.49
NEK3P51956 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
NEK3P51956 LRRC6P1-201ENST00000532188 885 ntBASIC5.76□□□□□ -1.49
NEK3P51956 OR4A43P-201ENST00000532938 908 ntBASIC5.76□□□□□ -1.49
NEK3P51956 AC137627.1-201ENST00000545761 289 ntBASIC5.76□□□□□ -1.49
NEK3P51956 AC087897.1-201ENST00000550134 156 ntBASIC5.76□□□□□ -1.49
NEK3P51956 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.76□□□□□ -1.49
NEK3P51956 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.76□□□□□ -1.49
NEK3P51956 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.76□□□□□ -1.49
NEK3P51956 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.76□□□□□ -1.49
NEK3P51956 CYP2C60P-201ENST00000566088 139 ntBASIC5.76□□□□□ -1.49
NEK3P51956 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.76□□□□□ -1.49
NEK3P51956 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.76□□□□□ -1.49
NEK3P51956 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.76□□□□□ -1.49
NEK3P51956 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.76□□□□□ -1.49
NEK3P51956 AC063977.5-201ENST00000601044 974 ntBASIC5.76□□□□□ -1.49
NEK3P51956 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.76□□□□□ -1.49
NEK3P51956 AL589674.2-201ENST00000604304 337 ntBASIC5.76□□□□□ -1.49
NEK3P51956 AC005377.1-201ENST00000605126 456 ntBASIC5.76□□□□□ -1.49
NEK3P51956 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
NEK3P51956 AC123768.4-201ENST00000616244 701 ntBASIC5.76□□□□□ -1.49
NEK3P51956 CYCSP41-201ENST00000616920 296 ntBASIC5.76□□□□□ -1.49
NEK3P51956 MIR6886-201ENST00000619864 61 ntBASIC5.76□□□□□ -1.49
NEK3P51956 AC109454.4-201ENST00000623411 649 ntBASIC5.76□□□□□ -1.49
NEK3P51956 CU639417.4-201ENST00000623928 207 ntBASIC5.76□□□□□ -1.49
NEK3P51956 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NEK3P51956 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.76□□□□□ -1.49
NEK3P51956 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NEK3P51956 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.76□□□□□ -1.49
NEK3P51956 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NEK3P51956 AL451142.2-201ENST00000429076 2090 ntBASIC5.76□□□□□ -1.49
NEK3P51956 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
NEK3P51956 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NEK3P51956 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NEK3P51956 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NEK3P51956 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NEK3P51956 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NEK3P51956 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
NEK3P51956 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NEK3P51956 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
NEK3P51956 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NEK3P51956 SRRM1P3-201ENST00000426911 2678 ntBASIC5.75□□□□□ -1.49
NEK3P51956 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
NEK3P51956 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
NEK3P51956 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NEK3P51956 YES1P1-201ENST00000418510 1628 ntBASIC5.75□□□□□ -1.49
NEK3P51956 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NEK3P51956 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NEK3P51956 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.75□□□□□ -1.49
NEK3P51956 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.75□□□□□ -1.49
NEK3P51956 AL603865.2-201ENST00000401679 213 ntBASIC5.75□□□□□ -1.49
NEK3P51956 RN7SKP229-201ENST00000410465 302 ntBASIC5.75□□□□□ -1.49
NEK3P51956 MTCO2P8-201ENST00000412213 658 ntBASIC5.75□□□□□ -1.49
NEK3P51956 AC079809.1-201ENST00000415468 276 ntBASIC5.75□□□□□ -1.49
NEK3P51956 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.75□□□□□ -1.49
NEK3P51956 TNPO1P1-201ENST00000423641 1138 ntBASIC5.75□□□□□ -1.49
NEK3P51956 AC009784.1-201ENST00000426484 460 ntBASIC5.75□□□□□ -1.49
NEK3P51956 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.75□□□□□ -1.49
NEK3P51956 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.75□□□□□ -1.49
NEK3P51956 GAPDHP48-201ENST00000436626 961 ntBASIC5.75□□□□□ -1.49
NEK3P51956 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.75□□□□□ -1.49
NEK3P51956 PTGES3P1-201ENST00000439531 483 ntBASIC5.75□□□□□ -1.49
NEK3P51956 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.75□□□□□ -1.49
NEK3P51956 RPL7P61-201ENST00000451721 751 ntBASIC5.75□□□□□ -1.49
NEK3P51956 DUXAP8-207ENST00000456786 622 ntBASIC5.75□□□□□ -1.49
NEK3P51956 RN7SL72P-201ENST00000460697 269 ntBASIC5.75□□□□□ -1.49
NEK3P51956 RPL7P6-201ENST00000480903 738 ntBASIC5.75□□□□□ -1.49
NEK3P51956 RPS7P6-201ENST00000485777 579 ntBASIC5.75□□□□□ -1.49
NEK3P51956 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NEK3P51956 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NEK3P51956 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms