Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.3□□□□□ -1.72
CX3CR1P49238 AC099063.2-201ENST00000446360 662 ntBASIC4.3□□□□□ -1.72
CX3CR1P49238 AL356390.1-201ENST00000455684 397 ntBASIC4.3□□□□□ -1.72
CX3CR1P49238 RN7SL517P-201ENST00000462240 305 ntBASIC4.3□□□□□ -1.72
CX3CR1P49238 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.3□□□□□ -1.72
CX3CR1P49238 AC117394.1-201ENST00000477323 567 ntBASIC4.3□□□□□ -1.72
CX3CR1P49238 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
CX3CR1P49238 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.3□□□□□ -1.72
CX3CR1P49238 Y_RNA.719-201ENST00000517156 106 ntBASIC4.3□□□□□ -1.72
CX3CR1P49238 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.3□□□□□ -1.72
CX3CR1P49238 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CX3CR1P49238 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.3□□□□□ -1.72
CX3CR1P49238 AC092490.3-201ENST00000545370 572 ntBASIC4.3□□□□□ -1.72
CX3CR1P49238 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.3□□□□□ -1.72
CX3CR1P49238 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.3□□□□□ -1.72
CX3CR1P49238 AC084033.1-201ENST00000550830 633 ntBASIC4.3□□□□□ -1.72
CX3CR1P49238 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CX3CR1P49238 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.3□□□□□ -1.72
CX3CR1P49238 TVP23CP2-201ENST00000571473 623 ntBASIC4.3□□□□□ -1.72
CX3CR1P49238 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.3□□□□□ -1.72
CX3CR1P49238 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.3□□□□□ -1.72
CX3CR1P49238 AC034236.3-201ENST00000605999 461 ntBASIC4.3□□□□□ -1.72
CX3CR1P49238 AL590410.1-201ENST00000617925 333 ntBASIC4.3□□□□□ -1.72
CX3CR1P49238 AC012414.7-202ENST00000622705 1090 ntBASIC4.3□□□□□ -1.72
CX3CR1P49238 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CX3CR1P49238 AL034370.1-201ENST00000397254 1590 ntBASIC4.3□□□□□ -1.72
CX3CR1P49238 THAP12P4-201ENST00000528321 2266 ntBASIC4.3□□□□□ -1.72
CX3CR1P49238 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CX3CR1P49238 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.3□□□□□ -1.72
CX3CR1P49238 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CX3CR1P49238 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CX3CR1P49238 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CR1P49238 AL133268.1-201ENST00000405676 1401 ntBASIC4.29□□□□□ -1.72
CX3CR1P49238 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.29□□□□□ -1.72
CX3CR1P49238 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.29□□□□□ -1.72
CX3CR1P49238 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.29□□□□□ -1.72
CX3CR1P49238 DDX18P4-201ENST00000511690 1966 ntBASIC4.29□□□□□ -1.72
CX3CR1P49238 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CR1P49238 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CR1P49238 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
CX3CR1P49238 RN7SKP224-201ENST00000364140 325 ntBASIC4.29□□□□□ -1.72
CX3CR1P49238 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CX3CR1P49238 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CR1P49238 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CR1P49238 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CX3CR1P49238 NCSTNP1-201ENST00000406229 144 ntBASIC4.29□□□□□ -1.72
CX3CR1P49238 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.29□□□□□ -1.72
CX3CR1P49238 AC009302.1-201ENST00000417147 390 ntBASIC4.29□□□□□ -1.72
CX3CR1P49238 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CR1P49238 AC079355.1-201ENST00000421770 223 ntBASIC4.29□□□□□ -1.72
CX3CR1P49238 AC007064.3-201ENST00000422608 359 ntBASIC4.29□□□□□ -1.72
CX3CR1P49238 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CR1P49238 AL137845.2-201ENST00000444292 988 ntBASIC4.29□□□□□ -1.72
CX3CR1P49238 AL163193.1-201ENST00000444895 788 ntBASIC4.29□□□□□ -1.72
CX3CR1P49238 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.29□□□□□ -1.72
CX3CR1P49238 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.29□□□□□ -1.72
CX3CR1P49238 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.29□□□□□ -1.72
CX3CR1P49238 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.29□□□□□ -1.72
CX3CR1P49238 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.29□□□□□ -1.72
CX3CR1P49238 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.29□□□□□ -1.72
CX3CR1P49238 AC027281.1-201ENST00000574178 758 ntBASIC4.29□□□□□ -1.72
CX3CR1P49238 RN7SL52P-201ENST00000584271 284 ntBASIC4.29□□□□□ -1.72
CX3CR1P49238 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.29□□□□□ -1.72
CX3CR1P49238 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.29□□□□□ -1.72
CX3CR1P49238 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CR1P49238 AL627230.1-201ENST00000613077 211 ntBASIC4.29□□□□□ -1.72
CX3CR1P49238 AL591926.8-201ENST00000616876 211 ntBASIC4.29□□□□□ -1.72
CX3CR1P49238 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.29□□□□□ -1.72
CX3CR1P49238 AL596275.2-204ENST00000641628 552 ntBASIC4.29□□□□□ -1.72
CX3CR1P49238 AL596275.2-206ENST00000641957 626 ntBASIC4.29□□□□□ -1.72
CX3CR1P49238 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.29□□□□□ -1.72
CX3CR1P49238 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
CX3CR1P49238 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CR1P49238 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CR1P49238 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CX3CR1P49238 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CR1P49238 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CX3CR1P49238 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CR1P49238 AL450326.2-201ENST00000421913 1962 ntBASIC4.29□□□□□ -1.72
CX3CR1P49238 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CR1P49238 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CR1P49238 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CR1P49238 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CR1P49238 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CR1P49238 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CR1P49238 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CR1P49238 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CR1P49238 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CR1P49238 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.28□□□□□ -1.72
CX3CR1P49238 RPL23P2-201ENST00000320371 421 ntBASIC4.28□□□□□ -1.72
CX3CR1P49238 RNU6-386P-201ENST00000362650 107 ntBASIC4.28□□□□□ -1.72
CX3CR1P49238 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CX3CR1P49238 RNU6-171P-201ENST00000384354 107 ntBASIC4.28□□□□□ -1.72
CX3CR1P49238 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CR1P49238 AL021331.1-201ENST00000402817 582 ntBASIC4.28□□□□□ -1.72
CX3CR1P49238 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CR1P49238 AF186996.5-201ENST00000418098 904 ntBASIC4.28□□□□□ -1.72
CX3CR1P49238 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.28□□□□□ -1.72
CX3CR1P49238 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CR1P49238 NMNAT1P2-201ENST00000435192 860 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms