Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC111000.3-201ENST00000508057 576 ntBASIC6□□□□□ -1.45
TM4SF4P48230 RN7SKP122-201ENST00000515923 296 ntBASIC6□□□□□ -1.45
TM4SF4P48230 RNA5SP43-201ENST00000516559 110 ntBASIC6□□□□□ -1.45
TM4SF4P48230 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6□□□□□ -1.45
TM4SF4P48230 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6□□□□□ -1.45
TM4SF4P48230 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6□□□□□ -1.45
TM4SF4P48230 AGGF1P9-201ENST00000561884 913 ntBASIC6□□□□□ -1.45
TM4SF4P48230 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6□□□□□ -1.45
TM4SF4P48230 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6□□□□□ -1.45
TM4SF4P48230 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6□□□□□ -1.45
TM4SF4P48230 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6□□□□□ -1.45
TM4SF4P48230 AP000919.1-202ENST00000581139 1264 ntBASIC6□□□□□ -1.45
TM4SF4P48230 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
TM4SF4P48230 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6□□□□□ -1.45
TM4SF4P48230 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6□□□□□ -1.45
TM4SF4P48230 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6□□□□□ -1.45
TM4SF4P48230 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6□□□□□ -1.45
TM4SF4P48230 AL512782.1-201ENST00000603093 364 ntBASIC6□□□□□ -1.45
TM4SF4P48230 AC124016.2-201ENST00000610058 665 ntBASIC6□□□□□ -1.45
TM4SF4P48230 VN1R9P-201ENST00000614184 867 ntBASIC6□□□□□ -1.45
TM4SF4P48230 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6□□□□□ -1.45
TM4SF4P48230 AC007342.8-201ENST00000623278 678 ntBASIC6□□□□□ -1.45
TM4SF4P48230 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6□□□□□ -1.45
TM4SF4P48230 AC006927.2-201ENST00000639256 389 ntBASIC6□□□□□ -1.45
TM4SF4P48230 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC6□□□□□ -1.45
TM4SF4P48230 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TM4SF4P48230 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
TM4SF4P48230 AC097063.1-201ENST00000426714 1797 ntBASIC6□□□□□ -1.45
TM4SF4P48230 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TM4SF4P48230 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6□□□□□ -1.45
TM4SF4P48230 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6□□□□□ -1.45
TM4SF4P48230 MFSD8-213ENST00000641134 1327 ntBASIC5.99□□□□□ -1.45
TM4SF4P48230 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TM4SF4P48230 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
TM4SF4P48230 AL606537.1-201ENST00000607258 2011 ntBASIC5.99□□□□□ -1.45
TM4SF4P48230 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.99□□□□□ -1.45
TM4SF4P48230 AC093297.3-201ENST00000607056 2517 ntBASIC5.99□□□□□ -1.45
TM4SF4P48230 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.99□□□□□ -1.45
TM4SF4P48230 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
TM4SF4P48230 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.99□□□□□ -1.45
TM4SF4P48230 AL132640.2-201ENST00000559968 1698 ntBASIC5.99□□□□□ -1.45
TM4SF4P48230 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TM4SF4P48230 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TM4SF4P48230 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TM4SF4P48230 RNU6-225P-201ENST00000384613 103 ntBASIC5.99□□□□□ -1.45
TM4SF4P48230 MIR1193-201ENST00000408109 78 ntBASIC5.99□□□□□ -1.45
TM4SF4P48230 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.99□□□□□ -1.45
TM4SF4P48230 AC241520.1-201ENST00000422654 1099 ntBASIC5.99□□□□□ -1.45
TM4SF4P48230 AC004975.1-201ENST00000428733 208 ntBASIC5.99□□□□□ -1.45
TM4SF4P48230 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.99□□□□□ -1.45
TM4SF4P48230 ETF1P3-201ENST00000430422 1160 ntBASIC5.99□□□□□ -1.45
TM4SF4P48230 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.99□□□□□ -1.45
TM4SF4P48230 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.99□□□□□ -1.45
TM4SF4P48230 AC073410.1-201ENST00000435125 589 ntBASIC5.99□□□□□ -1.45
TM4SF4P48230 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.99□□□□□ -1.45
TM4SF4P48230 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.99□□□□□ -1.45
TM4SF4P48230 AL353093.1-201ENST00000441292 436 ntBASIC5.99□□□□□ -1.45
TM4SF4P48230 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.99□□□□□ -1.45
TM4SF4P48230 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.99□□□□□ -1.45
TM4SF4P48230 NUTF2P7-201ENST00000453086 375 ntBASIC5.99□□□□□ -1.45
TM4SF4P48230 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.99□□□□□ -1.45
TM4SF4P48230 RN7SL188P-201ENST00000469842 285 ntBASIC5.99□□□□□ -1.45
TM4SF4P48230 RN7SL41P-201ENST00000476144 297 ntBASIC5.99□□□□□ -1.45
TM4SF4P48230 RN7SL319P-201ENST00000480656 221 ntBASIC5.99□□□□□ -1.45
TM4SF4P48230 RPS17P5-201ENST00000498293 408 ntBASIC5.99□□□□□ -1.45
TM4SF4P48230 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.99□□□□□ -1.45
TM4SF4P48230 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.99□□□□□ -1.45
TM4SF4P48230 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.99□□□□□ -1.45
TM4SF4P48230 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.99□□□□□ -1.45
TM4SF4P48230 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.99□□□□□ -1.45
TM4SF4P48230 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.99□□□□□ -1.45
TM4SF4P48230 AC022884.3-201ENST00000579571 248 ntBASIC5.99□□□□□ -1.45
TM4SF4P48230 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.99□□□□□ -1.45
TM4SF4P48230 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TM4SF4P48230 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.99□□□□□ -1.45
TM4SF4P48230 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.99□□□□□ -1.45
TM4SF4P48230 OR7A19P-201ENST00000608051 733 ntBASIC5.99□□□□□ -1.45
TM4SF4P48230 AC006840.1-201ENST00000623069 542 ntBASIC5.99□□□□□ -1.45
TM4SF4P48230 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.99□□□□□ -1.45
TM4SF4P48230 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.99□□□□□ -1.45
TM4SF4P48230 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.99□□□□□ -1.45
TM4SF4P48230 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.99□□□□□ -1.45
TM4SF4P48230 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TM4SF4P48230 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
TM4SF4P48230 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TM4SF4P48230 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
TM4SF4P48230 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TM4SF4P48230 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
TM4SF4P48230 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.99□□□□□ -1.45
TM4SF4P48230 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.99□□□□□ -1.45
TM4SF4P48230 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TM4SF4P48230 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.98□□□□□ -1.45
TM4SF4P48230 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TM4SF4P48230 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TM4SF4P48230 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TM4SF4P48230 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TM4SF4P48230 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TM4SF4P48230 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.98□□□□□ -1.45
TM4SF4P48230 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TM4SF4P48230 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms