Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.33□□□□□ -1.56
HADHAP40939 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.33□□□□□ -1.56
HADHAP40939 RNU6-513P-201ENST00000516104 104 ntBASIC5.33□□□□□ -1.56
HADHAP40939 AC100784.1-201ENST00000522790 310 ntBASIC5.33□□□□□ -1.56
HADHAP40939 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HADHAP40939 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HADHAP40939 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.33□□□□□ -1.56
HADHAP40939 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.33□□□□□ -1.56
HADHAP40939 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.33□□□□□ -1.56
HADHAP40939 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.33□□□□□ -1.56
HADHAP40939 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.33□□□□□ -1.56
HADHAP40939 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.33□□□□□ -1.56
HADHAP40939 AF230666.2-201ENST00000602328 725 ntBASIC5.33□□□□□ -1.56
HADHAP40939 AC009597.2-201ENST00000604659 592 ntBASIC5.33□□□□□ -1.56
HADHAP40939 AC079610.2-201ENST00000604818 690 ntBASIC5.33□□□□□ -1.56
HADHAP40939 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.33□□□□□ -1.56
HADHAP40939 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.33□□□□□ -1.56
HADHAP40939 AC007204.2-201ENST00000615022 616 ntBASIC5.33□□□□□ -1.56
HADHAP40939 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.33□□□□□ -1.56
HADHAP40939 AC005840.5-201ENST00000619166 599 ntBASIC5.33□□□□□ -1.56
HADHAP40939 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.33□□□□□ -1.56
HADHAP40939 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.33□□□□□ -1.56
HADHAP40939 AC023421.1-201ENST00000590535 1785 ntBASIC5.33□□□□□ -1.56
HADHAP40939 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HADHAP40939 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.33□□□□□ -1.56
HADHAP40939 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HADHAP40939 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HADHAP40939 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HADHAP40939 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.33□□□□□ -1.56
HADHAP40939 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HADHAP40939 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HADHAP40939 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.32□□□□□ -1.56
HADHAP40939 MIR105-2-201ENST00000385083 81 ntBASIC5.32□□□□□ -1.56
HADHAP40939 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HADHAP40939 RNA5SP339-201ENST00000390987 122 ntBASIC5.32□□□□□ -1.56
HADHAP40939 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.32□□□□□ -1.56
HADHAP40939 PTGES3P2-201ENST00000407942 482 ntBASIC5.32□□□□□ -1.56
HADHAP40939 MIR1286-201ENST00000408112 78 ntBASIC5.32□□□□□ -1.56
HADHAP40939 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.32□□□□□ -1.56
HADHAP40939 UBE2V1P11-201ENST00000411559 285 ntBASIC5.32□□□□□ -1.56
HADHAP40939 XKRYP4-201ENST00000414395 483 ntBASIC5.32□□□□□ -1.56
HADHAP40939 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HADHAP40939 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.32□□□□□ -1.56
HADHAP40939 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.32□□□□□ -1.56
HADHAP40939 MTCO3P21-201ENST00000430791 643 ntBASIC5.32□□□□□ -1.56
HADHAP40939 FAM96AP1-201ENST00000430879 482 ntBASIC5.32□□□□□ -1.56
HADHAP40939 AL035458.1-201ENST00000433096 585 ntBASIC5.32□□□□□ -1.56
HADHAP40939 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.32□□□□□ -1.56
HADHAP40939 CYCSP6-201ENST00000434498 302 ntBASIC5.32□□□□□ -1.56
HADHAP40939 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.32□□□□□ -1.56
HADHAP40939 RPS27P5-201ENST00000444247 244 ntBASIC5.32□□□□□ -1.56
HADHAP40939 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.32□□□□□ -1.56
HADHAP40939 AC092685.1-201ENST00000447960 1243 ntBASIC5.32□□□□□ -1.56
HADHAP40939 XKRYP5-201ENST00000449659 483 ntBASIC5.32□□□□□ -1.56
HADHAP40939 RPL21P6-201ENST00000479171 504 ntBASIC5.32□□□□□ -1.56
HADHAP40939 RPL7P39-201ENST00000481157 744 ntBASIC5.32□□□□□ -1.56
HADHAP40939 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.32□□□□□ -1.56
HADHAP40939 AC058823.1-201ENST00000485315 474 ntBASIC5.32□□□□□ -1.56
HADHAP40939 RN7SL814P-201ENST00000487715 300 ntBASIC5.32□□□□□ -1.56
HADHAP40939 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.32□□□□□ -1.56
HADHAP40939 RNA5SP34-201ENST00000516887 130 ntBASIC5.32□□□□□ -1.56
HADHAP40939 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.32□□□□□ -1.56
HADHAP40939 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.32□□□□□ -1.56
HADHAP40939 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.32□□□□□ -1.56
HADHAP40939 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.32□□□□□ -1.56
HADHAP40939 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HADHAP40939 LSM3P2-201ENST00000551246 273 ntBASIC5.32□□□□□ -1.56
HADHAP40939 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.32□□□□□ -1.56
HADHAP40939 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.32□□□□□ -1.56
HADHAP40939 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HADHAP40939 AC022884.2-201ENST00000578535 580 ntBASIC5.32□□□□□ -1.56
HADHAP40939 RBM22P1-201ENST00000578589 1214 ntBASIC5.32□□□□□ -1.56
HADHAP40939 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HADHAP40939 SDR42E1P1-201ENST00000611327 477 ntBASIC5.32□□□□□ -1.56
HADHAP40939 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HADHAP40939 AP004607.9-201ENST00000618202 316 ntBASIC5.32□□□□□ -1.56
HADHAP40939 AL163051.2-201ENST00000618976 735 ntBASIC5.32□□□□□ -1.56
HADHAP40939 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.32□□□□□ -1.56
HADHAP40939 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.32□□□□□ -1.56
HADHAP40939 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HADHAP40939 CASC19-264ENST00000641912 1184 ntBASIC5.32□□□□□ -1.56
HADHAP40939 PHKBP1-201ENST00000450951 1951 ntBASIC5.32□□□□□ -1.56
HADHAP40939 AC093535.2-201ENST00000624769 2326 ntBASIC5.32□□□□□ -1.56
HADHAP40939 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HADHAP40939 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HADHAP40939 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HADHAP40939 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.32□□□□□ -1.56
HADHAP40939 AC006210.2-201ENST00000367074 1545 ntBASIC5.32□□□□□ -1.56
HADHAP40939 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.32□□□□□ -1.56
HADHAP40939 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.32□□□□□ -1.56
HADHAP40939 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HADHAP40939 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HADHAP40939 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HADHAP40939 HSPD1P11-201ENST00000508643 1702 ntBASIC5.31□□□□□ -1.56
HADHAP40939 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
HADHAP40939 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HADHAP40939 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HADHAP40939 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HADHAP40939 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HADHAP40939 RNU6-252P-201ENST00000363232 107 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms