Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.35□□□□□ -1.71
CD40LGP29965 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.35□□□□□ -1.71
CD40LGP29965 AC090888.3-201ENST00000558917 509 ntBASIC4.35□□□□□ -1.71
CD40LGP29965 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.35□□□□□ -1.71
CD40LGP29965 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.35□□□□□ -1.71
CD40LGP29965 AC123786.2-201ENST00000603459 275 ntBASIC4.35□□□□□ -1.71
CD40LGP29965 AL139395.1-201ENST00000603662 160 ntBASIC4.35□□□□□ -1.71
CD40LGP29965 AC016252.1-201ENST00000609721 474 ntBASIC4.35□□□□□ -1.71
CD40LGP29965 AC116447.1-201ENST00000613153 453 ntBASIC4.35□□□□□ -1.71
CD40LGP29965 AL118522.2-201ENST00000616045 615 ntBASIC4.35□□□□□ -1.71
CD40LGP29965 WBP1LP8-201ENST00000617401 327 ntBASIC4.35□□□□□ -1.71
CD40LGP29965 SNORA11.6-201ENST00000619030 128 ntBASIC4.35□□□□□ -1.71
CD40LGP29965 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD40LGP29965 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD40LGP29965 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD40LGP29965 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.35□□□□□ -1.71
CD40LGP29965 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD40LGP29965 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.35□□□□□ -1.71
CD40LGP29965 AC009313.2-201ENST00000417893 1941 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 Z73965.1-201ENST00000623412 2297 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.34□□□□□ -1.71
CD40LGP29965 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CD40LGP29965 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CD40LGP29965 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CD40LGP29965 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CD40LGP29965 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CD40LGP29965 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CD40LGP29965 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CD40LGP29965 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
CD40LGP29965 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.34□□□□□ -1.71
CD40LGP29965 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CD40LGP29965 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CD40LGP29965 RN7SKP15-201ENST00000364742 309 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 RNA5SP90-201ENST00000364801 99 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CD40LGP29965 LRRC37BP1-201ENST00000398851 714 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.34□□□□□ -1.71
CD40LGP29965 HSPD1P16-201ENST00000402302 394 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 OR6E1P-201ENST00000414424 923 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 AC004552.1-201ENST00000419089 348 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 OR2AM1P-201ENST00000422137 422 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.34□□□□□ -1.71
CD40LGP29965 BX119904.1-201ENST00000432026 348 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 FMO7P-201ENST00000436045 768 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 ELOCP10-201ENST00000440624 327 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 SETP20-201ENST00000457046 852 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 RPS26P3-201ENST00000470205 348 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 SIAH1P1-201ENST00000479411 923 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 AC012158.1-204ENST00000483430 465 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 AC090543.2-201ENST00000483963 348 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 AC004057.1-201ENST00000485827 348 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 IGLVIV-64-201ENST00000518581 301 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.34□□□□□ -1.71
CD40LGP29965 IGLV3-26-201ENST00000520756 302 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 AC090819.1-201ENST00000523800 1111 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.34□□□□□ -1.71
CD40LGP29965 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.34□□□□□ -1.71
CD40LGP29965 AC135626.1-201ENST00000556983 435 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.34□□□□□ -1.71
CD40LGP29965 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CD40LGP29965 AC005520.3-201ENST00000602874 370 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 ELOCP34-201ENST00000604436 327 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 AC104687.2-201ENST00000604442 342 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.34□□□□□ -1.71
CD40LGP29965 AC132068.1-201ENST00000623805 459 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 AP003400.2-201ENST00000624036 666 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.34□□□□□ -1.71
CD40LGP29965 MIR4302-201ENST00000638058 60 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CD40LGP29965 CYP1D1P-201ENST00000416662 1433 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CD40LGP29965 RNF19BPY-201ENST00000458209 1550 ntBASIC4.34□□□□□ -1.71
CD40LGP29965 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
CD40LGP29965 AC132825.1-201ENST00000463573 2247 ntBASIC4.34□□□□□ -1.72
CD40LGP29965 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
CD40LGP29965 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
CD40LGP29965 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CD40LGP29965 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CD40LGP29965 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CD40LGP29965 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CD40LGP29965 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CD40LGP29965 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
CD40LGP29965 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CD40LGP29965 ZNF733P-202ENST00000444809 1573 ntBASIC4.33□□□□□ -1.72
CD40LGP29965 CASC19-281ENST00000642118 1554 ntBASIC4.33□□□□□ -1.72
CD40LGP29965 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CD40LGP29965 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CD40LGP29965 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CD40LGP29965 GCNT6-201ENST00000379591 934 ntBASIC4.33□□□□□ -1.72
CD40LGP29965 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CD40LGP29965 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.33□□□□□ -1.72
CD40LGP29965 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.33□□□□□ -1.72
CD40LGP29965 RPL6P29-201ENST00000414863 865 ntBASIC4.33□□□□□ -1.72
CD40LGP29965 RPS12P5-201ENST00000423449 371 ntBASIC4.33□□□□□ -1.72
CD40LGP29965 SEC63P1-201ENST00000425785 1258 ntBASIC4.33□□□□□ -1.72
CD40LGP29965 DSTNP5-201ENST00000427921 523 ntBASIC4.33□□□□□ -1.72
CD40LGP29965 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.33□□□□□ -1.72
CD40LGP29965 AC104651.2-201ENST00000447549 528 ntBASIC4.33□□□□□ -1.72
CD40LGP29965 AC104306.1-201ENST00000449702 371 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms