Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
ATF4P18848 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.87□□□□□ -1.47
ATF4P18848 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.87□□□□□ -1.47
ATF4P18848 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATF4P18848 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
ATF4P18848 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ATF4P18848 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATF4P18848 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATF4P18848 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATF4P18848 MIR128-2-201ENST00000384893 84 ntBASIC5.87□□□□□ -1.47
ATF4P18848 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ATF4P18848 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATF4P18848 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.87□□□□□ -1.47
ATF4P18848 AL358942.1-201ENST00000418595 1178 ntBASIC5.87□□□□□ -1.47
ATF4P18848 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.87□□□□□ -1.47
ATF4P18848 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.87□□□□□ -1.47
ATF4P18848 RPL12P46-201ENST00000436610 195 ntBASIC5.87□□□□□ -1.47
ATF4P18848 AL590682.1-201ENST00000437248 344 ntBASIC5.87□□□□□ -1.47
ATF4P18848 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.87□□□□□ -1.47
ATF4P18848 RABEPKP1-201ENST00000440529 1026 ntBASIC5.87□□□□□ -1.47
ATF4P18848 AC092601.1-201ENST00000444526 383 ntBASIC5.87□□□□□ -1.47
ATF4P18848 AC004980.3-201ENST00000447046 365 ntBASIC5.87□□□□□ -1.47
ATF4P18848 NANOGNBP1-201ENST00000448444 480 ntBASIC5.87□□□□□ -1.47
ATF4P18848 AC093392.2-201ENST00000450682 337 ntBASIC5.87□□□□□ -1.47
ATF4P18848 AC104073.1-201ENST00000451988 151 ntBASIC5.87□□□□□ -1.47
ATF4P18848 AC073476.1-201ENST00000452854 407 ntBASIC5.87□□□□□ -1.47
ATF4P18848 AC098824.1-201ENST00000453565 980 ntBASIC5.87□□□□□ -1.47
ATF4P18848 Z82190.1-201ENST00000454534 490 ntBASIC5.87□□□□□ -1.47
ATF4P18848 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.87□□□□□ -1.47
ATF4P18848 RN7SL751P-201ENST00000473281 284 ntBASIC5.87□□□□□ -1.47
ATF4P18848 RN7SL272P-201ENST00000487762 289 ntBASIC5.87□□□□□ -1.47
ATF4P18848 AC105252.1-201ENST00000503089 286 ntBASIC5.87□□□□□ -1.47
ATF4P18848 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.87□□□□□ -1.47
ATF4P18848 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.87□□□□□ -1.47
ATF4P18848 AC110775.1-201ENST00000513721 462 ntBASIC5.87□□□□□ -1.47
ATF4P18848 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC5.87□□□□□ -1.47
ATF4P18848 SCARNA20.1-201ENST00000516009 138 ntBASIC5.87□□□□□ -1.47
ATF4P18848 MTCYBP41-201ENST00000528913 1123 ntBASIC5.87□□□□□ -1.47
ATF4P18848 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.87□□□□□ -1.47
ATF4P18848 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC5.87□□□□□ -1.47
ATF4P18848 AP003174.3-201ENST00000537926 516 ntBASIC5.87□□□□□ -1.47
ATF4P18848 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.87□□□□□ -1.47
ATF4P18848 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.87□□□□□ -1.47
ATF4P18848 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.87□□□□□ -1.47
ATF4P18848 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.87□□□□□ -1.47
ATF4P18848 AC006960.3-201ENST00000561845 705 ntBASIC5.87□□□□□ -1.47
ATF4P18848 AC063923.2-201ENST00000562158 928 ntBASIC5.87□□□□□ -1.47
ATF4P18848 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATF4P18848 RN7SL311P-201ENST00000579858 306 ntBASIC5.87□□□□□ -1.47
ATF4P18848 MIR3682-201ENST00000581338 84 ntBASIC5.87□□□□□ -1.47
ATF4P18848 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC5.87□□□□□ -1.47
ATF4P18848 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC5.87□□□□□ -1.47
ATF4P18848 NDUFA3P1-201ENST00000588007 252 ntBASIC5.87□□□□□ -1.47
ATF4P18848 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.87□□□□□ -1.47
ATF4P18848 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC5.87□□□□□ -1.47
ATF4P18848 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.87□□□□□ -1.47
ATF4P18848 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
ATF4P18848 AC005790.1-201ENST00000619774 450 ntBASIC5.87□□□□□ -1.47
ATF4P18848 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC5.87□□□□□ -1.47
ATF4P18848 MIR3120-201ENST00000636555 81 ntBASIC5.87□□□□□ -1.47
ATF4P18848 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ATF4P18848 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.87□□□□□ -1.47
ATF4P18848 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATF4P18848 AP002001.2-201ENST00000529025 1469 ntBASIC5.87□□□□□ -1.47
ATF4P18848 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATF4P18848 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATF4P18848 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ATF4P18848 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATF4P18848 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
ATF4P18848 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATF4P18848 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
ATF4P18848 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.86□□□□□ -1.47
ATF4P18848 STX3-208ENST00000641815 3236 ntBASIC5.86□□□□□ -1.47
ATF4P18848 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ATF4P18848 DDX10P2-201ENST00000417796 2614 ntBASIC5.86□□□□□ -1.47
ATF4P18848 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC5.86□□□□□ -1.47
ATF4P18848 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATF4P18848 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC5.86□□□□□ -1.47
ATF4P18848 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ATF4P18848 AC093844.1-201ENST00000514910 1361 ntBASIC5.86□□□□□ -1.47
ATF4P18848 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ATF4P18848 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ATF4P18848 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ATF4P18848 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.86□□□□□ -1.47
ATF4P18848 Y_RNA.608-201ENST00000410647 95 ntBASIC5.86□□□□□ -1.47
ATF4P18848 MTND4LP11-201ENST00000422184 280 ntBASIC5.86□□□□□ -1.47
ATF4P18848 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.86□□□□□ -1.47
ATF4P18848 OR10T1P-201ENST00000424327 947 ntBASIC5.86□□□□□ -1.47
ATF4P18848 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC5.86□□□□□ -1.47
ATF4P18848 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATF4P18848 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC5.86□□□□□ -1.47
ATF4P18848 MTCO1P42-201ENST00000457379 726 ntBASIC5.86□□□□□ -1.47
ATF4P18848 PLGLA-201ENST00000465668 449 ntBASIC5.86□□□□□ -1.47
ATF4P18848 AC109454.1-201ENST00000471205 498 ntBASIC5.86□□□□□ -1.47
ATF4P18848 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.86□□□□□ -1.47
ATF4P18848 RN7SL314P-201ENST00000490735 292 ntBASIC5.86□□□□□ -1.47
ATF4P18848 AP001025.2-201ENST00000490908 477 ntBASIC5.86□□□□□ -1.47
ATF4P18848 AC034222.1-201ENST00000494052 532 ntBASIC5.86□□□□□ -1.47
ATF4P18848 AC093767.1-201ENST00000504523 156 ntBASIC5.86□□□□□ -1.47
ATF4P18848 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms