Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VCLP18206 AL390316.1-201ENST00000406279 553 ntBASIC5.08□□□□□ -1.6
VCLP18206 AL590806.1-201ENST00000415818 853 ntBASIC5.08□□□□□ -1.6
VCLP18206 AL031584.1-201ENST00000447169 754 ntBASIC5.08□□□□□ -1.6
VCLP18206 RPL7L1P1-201ENST00000448259 785 ntBASIC5.08□□□□□ -1.6
VCLP18206 AL627224.1-201ENST00000448334 444 ntBASIC5.08□□□□□ -1.6
VCLP18206 RPS6P2-201ENST00000454208 705 ntBASIC5.08□□□□□ -1.6
VCLP18206 AC097484.1-201ENST00000471148 389 ntBASIC5.08□□□□□ -1.6
VCLP18206 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.08□□□□□ -1.6
VCLP18206 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.08□□□□□ -1.6
VCLP18206 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.08□□□□□ -1.6
VCLP18206 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.08□□□□□ -1.6
VCLP18206 AC034244.2-201ENST00000514668 858 ntBASIC5.08□□□□□ -1.6
VCLP18206 MTCYBP19-201ENST00000517463 1124 ntBASIC5.08□□□□□ -1.6
VCLP18206 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.08□□□□□ -1.6
VCLP18206 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.08□□□□□ -1.6
VCLP18206 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.08□□□□□ -1.6
VCLP18206 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.08□□□□□ -1.6
VCLP18206 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.08□□□□□ -1.6
VCLP18206 AC051619.2-201ENST00000559063 397 ntBASIC5.08□□□□□ -1.6
VCLP18206 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VCLP18206 MIR3691-201ENST00000578066 90 ntBASIC5.08□□□□□ -1.6
VCLP18206 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.08□□□□□ -1.6
VCLP18206 AC068020.1-201ENST00000594215 661 ntBASIC5.08□□□□□ -1.6
VCLP18206 AC130352.1-201ENST00000602979 661 ntBASIC5.08□□□□□ -1.6
VCLP18206 AP002799.1-201ENST00000623552 423 ntBASIC5.08□□□□□ -1.6
VCLP18206 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.08□□□□□ -1.6
VCLP18206 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VCLP18206 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
VCLP18206 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.08□□□□□ -1.6
VCLP18206 THAP12P4-201ENST00000528321 2266 ntBASIC5.08□□□□□ -1.6
VCLP18206 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VCLP18206 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.08□□□□□ -1.6
VCLP18206 AL034370.1-201ENST00000397254 1590 ntBASIC5.08□□□□□ -1.6
VCLP18206 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VCLP18206 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VCLP18206 AC000123.3-201ENST00000624029 4975 ntBASIC5.07□□□□□ -1.6
VCLP18206 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
VCLP18206 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VCLP18206 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.07□□□□□ -1.6
VCLP18206 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VCLP18206 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
VCLP18206 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
VCLP18206 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
VCLP18206 AC027228.2-201ENST00000567141 2154 ntBASIC5.07□□□□□ -1.6
VCLP18206 BMS1P13-201ENST00000417301 885 ntBASIC5.07□□□□□ -1.6
VCLP18206 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.07□□□□□ -1.6
VCLP18206 RPS26P13-201ENST00000419030 330 ntBASIC5.07□□□□□ -1.6
VCLP18206 BRWD1P3-201ENST00000428816 390 ntBASIC5.07□□□□□ -1.6
VCLP18206 TRIM60P13-201ENST00000432350 1283 ntBASIC5.07□□□□□ -1.6
VCLP18206 TMX2P1-201ENST00000436507 708 ntBASIC5.07□□□□□ -1.6
VCLP18206 AC073850.1-201ENST00000449243 255 ntBASIC5.07□□□□□ -1.6
VCLP18206 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VCLP18206 AC021087.2-201ENST00000504656 1203 ntBASIC5.07□□□□□ -1.6
VCLP18206 AC097173.1-201ENST00000505862 819 ntBASIC5.07□□□□□ -1.6
VCLP18206 AC021146.7-201ENST00000509604 775 ntBASIC5.07□□□□□ -1.6
VCLP18206 AC016550.3-201ENST00000515706 767 ntBASIC5.07□□□□□ -1.6
VCLP18206 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.07□□□□□ -1.6
VCLP18206 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.07□□□□□ -1.6
VCLP18206 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
VCLP18206 AC018695.5-201ENST00000605872 315 ntBASIC5.07□□□□□ -1.6
VCLP18206 EIF3FP1-201ENST00000613970 806 ntBASIC5.07□□□□□ -1.6
VCLP18206 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.07□□□□□ -1.6
VCLP18206 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.07□□□□□ -1.6
VCLP18206 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
VCLP18206 CASC19-222ENST00000641321 1173 ntBASIC5.07□□□□□ -1.6
VCLP18206 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.07□□□□□ -1.6
VCLP18206 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VCLP18206 MAPK10-286ENST00000641208 8747 ntBASIC5.07□□□□□ -1.6
VCLP18206 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.07□□□□□ -1.6
VCLP18206 AC015813.6-201ENST00000624409 5808 ntBASIC5.07□□□□□ -1.6
VCLP18206 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.07□□□□□ -1.6
VCLP18206 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
VCLP18206 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
VCLP18206 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
VCLP18206 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
VCLP18206 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VCLP18206 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VCLP18206 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VCLP18206 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.06□□□□□ -1.6
VCLP18206 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VCLP18206 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
VCLP18206 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VCLP18206 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
VCLP18206 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VCLP18206 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.06□□□□□ -1.6
VCLP18206 Z97832.1-201ENST00000402490 328 ntBASIC5.06□□□□□ -1.6
VCLP18206 AL034374.1-201ENST00000406329 351 ntBASIC5.06□□□□□ -1.6
VCLP18206 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.06□□□□□ -1.6
VCLP18206 DPPA2P3-201ENST00000411853 655 ntBASIC5.06□□□□□ -1.6
VCLP18206 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.06□□□□□ -1.6
VCLP18206 AC093162.1-201ENST00000419682 124 ntBASIC5.06□□□□□ -1.6
VCLP18206 EI24P4-201ENST00000423683 1078 ntBASIC5.06□□□□□ -1.6
VCLP18206 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.06□□□□□ -1.6
VCLP18206 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.06□□□□□ -1.6
VCLP18206 AL590623.1-201ENST00000427864 105 ntBASIC5.06□□□□□ -1.6
VCLP18206 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.06□□□□□ -1.6
VCLP18206 RPL35AP21-201ENST00000437667 333 ntBASIC5.06□□□□□ -1.6
VCLP18206 AC092647.3-201ENST00000443044 633 ntBASIC5.06□□□□□ -1.6
VCLP18206 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms