Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RN7SKP224-201ENST00000364140 325 ntBASIC7.91□□□□□ -1.14
TOP2AP11388 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC7.91□□□□□ -1.14
TOP2AP11388 RN7SKP33-201ENST00000410942 340 ntBASIC7.91□□□□□ -1.14
TOP2AP11388 NRBF2P2-201ENST00000413087 861 ntBASIC7.91□□□□□ -1.14
TOP2AP11388 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TOP2AP11388 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC7.91□□□□□ -1.14
TOP2AP11388 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC7.91□□□□□ -1.14
TOP2AP11388 SNORA31.9-201ENST00000516429 84 ntBASIC7.91□□□□□ -1.14
TOP2AP11388 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC7.91□□□□□ -1.14
TOP2AP11388 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC7.91□□□□□ -1.14
TOP2AP11388 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC7.91□□□□□ -1.14
TOP2AP11388 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC7.91□□□□□ -1.14
TOP2AP11388 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC7.91□□□□□ -1.14
TOP2AP11388 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC7.91□□□□□ -1.14
TOP2AP11388 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TOP2AP11388 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
TOP2AP11388 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
TOP2AP11388 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
TOP2AP11388 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
TOP2AP11388 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC7.9□□□□□ -1.14
TOP2AP11388 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC7.9□□□□□ -1.14
TOP2AP11388 SNORA84-201ENST00000459229 133 ntBASIC7.9□□□□□ -1.14
TOP2AP11388 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC7.9□□□□□ -1.14
TOP2AP11388 RGS5-218ENST00000526176 574 ntTSL 4 BASIC7.9□□□□□ -1.14
TOP2AP11388 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC7.9□□□□□ -1.14
TOP2AP11388 AC006116.5-201ENST00000591936 559 ntBASIC7.9□□□□□ -1.14
TOP2AP11388 AC022916.3-201ENST00000592961 742 ntBASIC7.9□□□□□ -1.14
TOP2AP11388 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC7.9□□□□□ -1.14
TOP2AP11388 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC7.9□□□□□ -1.14
TOP2AP11388 AC007546.1-201ENST00000619452 559 ntBASIC7.9□□□□□ -1.14
TOP2AP11388 AC015804.1-201ENST00000622935 435 ntBASIC7.9□□□□□ -1.14
TOP2AP11388 AC034229.5-201ENST00000624258 185 ntBASIC7.9□□□□□ -1.14
TOP2AP11388 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
TOP2AP11388 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
TOP2AP11388 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC7.9□□□□□ -1.15
TOP2AP11388 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TOP2AP11388 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TOP2AP11388 MIR331-201ENST00000362302 94 ntBASIC7.89□□□□□ -1.15
TOP2AP11388 AC114495.1-201ENST00000441274 436 ntBASIC7.89□□□□□ -1.15
TOP2AP11388 RRM2P4-201ENST00000441721 562 ntBASIC7.89□□□□□ -1.15
TOP2AP11388 PPM1AP1-201ENST00000502740 1135 ntBASIC7.89□□□□□ -1.15
TOP2AP11388 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC7.89□□□□□ -1.15
TOP2AP11388 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC7.89□□□□□ -1.15
TOP2AP11388 GLRXP2-201ENST00000555594 321 ntBASIC7.89□□□□□ -1.15
TOP2AP11388 AC034105.4-201ENST00000568304 277 ntBASIC7.89□□□□□ -1.15
TOP2AP11388 MIR4429-201ENST00000580105 73 ntBASIC7.89□□□□□ -1.15
TOP2AP11388 RN7SL600P-201ENST00000581811 299 ntBASIC7.89□□□□□ -1.15
TOP2AP11388 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
TOP2AP11388 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
TOP2AP11388 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TOP2AP11388 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TOP2AP11388 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TOP2AP11388 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TOP2AP11388 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TOP2AP11388 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TOP2AP11388 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TOP2AP11388 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TOP2AP11388 ANAPC1P1-201ENST00000426186 2145 ntBASIC7.89□□□□□ -1.15
TOP2AP11388 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC7.88□□□□□ -1.15
TOP2AP11388 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.88□□□□□ -1.15
TOP2AP11388 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC7.88□□□□□ -1.15
TOP2AP11388 BPIFA4P-203ENST00000603168 689 ntBASIC7.88□□□□□ -1.15
TOP2AP11388 AC099676.1-201ENST00000608886 657 ntBASIC7.88□□□□□ -1.15
TOP2AP11388 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TOP2AP11388 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
TOP2AP11388 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TOP2AP11388 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TOP2AP11388 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
TOP2AP11388 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC7.88□□□□□ -1.15
TOP2AP11388 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TOP2AP11388 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
TOP2AP11388 SNORA48.7-201ENST00000391302 135 ntBASIC7.88□□□□□ -1.15
TOP2AP11388 AC034236.1-201ENST00000469891 373 ntBASIC7.88□□□□□ -1.15
TOP2AP11388 RNA5SP116-201ENST00000516132 98 ntBASIC7.88□□□□□ -1.15
TOP2AP11388 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC7.88□□□□□ -1.15
TOP2AP11388 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC7.88□□□□□ -1.15
TOP2AP11388 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC7.88□□□□□ -1.15
TOP2AP11388 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC7.88□□□□□ -1.15
TOP2AP11388 AC027216.1-201ENST00000577726 685 ntBASIC7.88□□□□□ -1.15
TOP2AP11388 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC7.88□□□□□ -1.15
TOP2AP11388 AL354984.3-201ENST00000604803 325 ntBASIC7.88□□□□□ -1.15
TOP2AP11388 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC7.88□□□□□ -1.15
TOP2AP11388 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TOP2AP11388 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.87□□□□□ -1.15
TOP2AP11388 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TOP2AP11388 AL022323.4-201ENST00000623980 13120 ntBASIC7.87□□□□□ -1.15
TOP2AP11388 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
TOP2AP11388 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TOP2AP11388 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC7.87□□□□□ -1.15
TOP2AP11388 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TOP2AP11388 AC104260.2-201ENST00000623551 3497 ntBASIC7.87□□□□□ -1.15
TOP2AP11388 BCORP1-203ENST00000513194 5093 ntBASIC7.87□□□□□ -1.15
TOP2AP11388 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TOP2AP11388 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
TOP2AP11388 RPL5P2-201ENST00000429598 854 ntBASIC7.87□□□□□ -1.15
TOP2AP11388 BMS1P19-201ENST00000433925 393 ntBASIC7.87□□□□□ -1.15
TOP2AP11388 RPL21P89-201ENST00000444021 467 ntBASIC7.87□□□□□ -1.15
TOP2AP11388 RN7SL817P-201ENST00000480777 288 ntBASIC7.87□□□□□ -1.15
TOP2AP11388 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC7.87□□□□□ -1.15
TOP2AP11388 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms