Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.61□□□□□ -1.51
HOXC6P09630 AC006453.5-201ENST00000636451 619 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXC6P09630 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXC6P09630 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HOXC6P09630 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXC6P09630 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXC6P09630 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HOXC6P09630 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.61□□□□□ -1.51
HOXC6P09630 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC6P09630 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC6P09630 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC6P09630 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXC6P09630 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC6P09630 AL132656.3-201ENST00000606384 1595 ntBASIC5.6□□□□□ -1.51
HOXC6P09630 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC6P09630 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC6P09630 ELOCP19-201ENST00000411919 318 ntBASIC5.6□□□□□ -1.51
HOXC6P09630 OR5M12P-201ENST00000423388 929 ntBASIC5.6□□□□□ -1.51
HOXC6P09630 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXC6P09630 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXC6P09630 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXC6P09630 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.6□□□□□ -1.51
HOXC6P09630 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.6□□□□□ -1.51
HOXC6P09630 EIF2S2P2-201ENST00000447161 982 ntBASIC5.6□□□□□ -1.51
HOXC6P09630 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXC6P09630 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXC6P09630 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.6□□□□□ -1.51
HOXC6P09630 EIF2S2P4-201ENST00000461070 984 ntBASIC5.6□□□□□ -1.51
HOXC6P09630 OR52A4P-201ENST00000472867 958 ntBASIC5.6□□□□□ -1.51
HOXC6P09630 AC116562.1-201ENST00000485355 781 ntBASIC5.6□□□□□ -1.51
HOXC6P09630 TPT1P8-201ENST00000510120 555 ntBASIC5.6□□□□□ -1.51
HOXC6P09630 MTATP6P9-201ENST00000515039 680 ntBASIC5.6□□□□□ -1.51
HOXC6P09630 SNORA70.17-201ENST00000516449 133 ntBASIC5.6□□□□□ -1.51
HOXC6P09630 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXC6P09630 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXC6P09630 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HOXC6P09630 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXC6P09630 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXC6P09630 AC012414.2-201ENST00000559474 187 ntBASIC5.6□□□□□ -1.51
HOXC6P09630 NDUFB4P11-201ENST00000560510 395 ntBASIC5.6□□□□□ -1.51
HOXC6P09630 MIR4433B-201ENST00000581329 102 ntBASIC5.6□□□□□ -1.51
HOXC6P09630 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXC6P09630 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC6P09630 AC005776.1-201ENST00000603164 290 ntBASIC5.6□□□□□ -1.51
HOXC6P09630 AC006338.2-201ENST00000616864 791 ntBASIC5.6□□□□□ -1.51
HOXC6P09630 AL359757.1-201ENST00000623176 255 ntBASIC5.6□□□□□ -1.51
HOXC6P09630 AP001153.1-201ENST00000641024 338 ntBASIC5.6□□□□□ -1.51
HOXC6P09630 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXC6P09630 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC6P09630 TET1P1-201ENST00000426627 2301 ntBASIC5.6□□□□□ -1.51
HOXC6P09630 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HOXC6P09630 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC6P09630 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC6P09630 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXC6P09630 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC6P09630 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC6P09630 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC6P09630 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC6P09630 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC6P09630 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC6P09630 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC6P09630 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HOXC6P09630 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
HOXC6P09630 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC6P09630 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC6P09630 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC6P09630 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXC6P09630 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HOXC6P09630 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC6P09630 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC6P09630 MIR129-1-201ENST00000384972 72 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 TRAV35-201ENST00000390462 330 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 AL589655.1-201ENST00000405398 482 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXC6P09630 MTATP6P31-201ENST00000406985 692 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 RN7SKP199-201ENST00000410325 305 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 PCNPP4-201ENST00000414817 517 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXC6P09630 CENPIP1-201ENST00000425713 902 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 RSL24D1P6-201ENST00000426934 401 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXC6P09630 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXC6P09630 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXC6P09630 MTND1P26-201ENST00000440488 538 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 TXNP2-201ENST00000443918 295 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 AC010733.1-201ENST00000451515 401 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 CEACAMP6-201ENST00000452007 574 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXC6P09630 TVP23BP2-201ENST00000455082 615 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 AP002371.1-201ENST00000463604 433 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 AC118282.1-201ENST00000506408 765 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXC6P09630 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXC6P09630 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.59□□□□□ -1.51
HOXC6P09630 OR5M2P-201ENST00000529003 936 ntBASIC5.59□□□□□ -1.51
HOXC6P09630 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXC6P09630 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXC6P09630 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms