Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
SFTPBP07988 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SFTPBP07988 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SFTPBP07988 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SFTPBP07988 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SFTPBP07988 AC093719.1-202ENST00000392735 373 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SFTPBP07988 NCSTNP1-201ENST00000406229 144 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 OR4K12P-201ENST00000406538 961 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 RNU2-50P-201ENST00000410494 143 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.51□□□□□ -1.69
SFTPBP07988 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.51□□□□□ -1.69
SFTPBP07988 AL357078.2-201ENST00000416486 427 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 AC099336.2-201ENST00000422457 254 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 AC073464.3-201ENST00000422564 712 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 RPL7L1P9-201ENST00000431298 745 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 ELOCP10-201ENST00000440624 327 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 AC007000.2-201ENST00000442564 487 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 GAPDHP25-201ENST00000447061 1001 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 RPL7P45-201ENST00000455851 743 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 AC099560.2-201ENST00000457554 255 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.51□□□□□ -1.69
SFTPBP07988 COPS8P2-201ENST00000473228 627 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 AC108729.2-201ENST00000476543 840 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 RPL7P39-201ENST00000481157 744 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 RN7SL809P-201ENST00000482040 297 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 RPL7P41-201ENST00000485823 957 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 RN7SL814P-201ENST00000487715 300 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 RN7SL346P-201ENST00000491561 294 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 RPL37AP8-201ENST00000494116 276 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.51□□□□□ -1.69
SFTPBP07988 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.51□□□□□ -1.69
SFTPBP07988 SETP12-201ENST00000514068 805 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.51□□□□□ -1.69
SFTPBP07988 RNA5SP228-201ENST00000516232 133 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
SFTPBP07988 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.51□□□□□ -1.69
SFTPBP07988 OR10G5P-201ENST00000532733 358 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.51□□□□□ -1.69
SFTPBP07988 AC040958.1-201ENST00000561102 201 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 LINC00557-201ENST00000563184 1279 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.51□□□□□ -1.69
SFTPBP07988 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.51□□□□□ -1.69
SFTPBP07988 CBX3P2-202ENST00000583365 535 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.51□□□□□ -1.69
SFTPBP07988 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.51□□□□□ -1.69
SFTPBP07988 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.51□□□□□ -1.69
SFTPBP07988 ELOCP34-201ENST00000604436 327 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 AC090525.3-201ENST00000605601 189 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 AC004775.1-201ENST00000607389 753 ntBASIC4.51□□□□□ -1.69
SFTPBP07988 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.51□□□□□ -1.69
SFTPBP07988 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SFTPBP07988 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.51□□□□□ -1.69
SFTPBP07988 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SFTPBP07988 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SFTPBP07988 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SFTPBP07988 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.51□□□□□ -1.69
SFTPBP07988 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SFTPBP07988 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.51□□□□□ -1.69
SFTPBP07988 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.51□□□□□ -1.69
SFTPBP07988 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SFTPBP07988 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SFTPBP07988 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.5□□□□□ -1.69
SFTPBP07988 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SFTPBP07988 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.5□□□□□ -1.69
SFTPBP07988 AC235565.1-201ENST00000456962 1325 ntBASIC4.5□□□□□ -1.69
SFTPBP07988 STX3-208ENST00000641815 3236 ntBASIC4.5□□□□□ -1.69
SFTPBP07988 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SFTPBP07988 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SFTPBP07988 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SFTPBP07988 MIR133B-201ENST00000362210 119 ntBASIC4.5□□□□□ -1.69
SFTPBP07988 RN7SKP153-201ENST00000365026 316 ntBASIC4.5□□□□□ -1.69
SFTPBP07988 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SFTPBP07988 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SFTPBP07988 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.5□□□□□ -1.69
SFTPBP07988 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.5□□□□□ -1.69
SFTPBP07988 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.5□□□□□ -1.69
SFTPBP07988 AC009302.1-201ENST00000417147 390 ntBASIC4.5□□□□□ -1.69
SFTPBP07988 AL133325.1-201ENST00000421090 382 ntBASIC4.5□□□□□ -1.69
SFTPBP07988 AL590609.2-201ENST00000421430 368 ntBASIC4.5□□□□□ -1.69
SFTPBP07988 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SFTPBP07988 AL160175.1-201ENST00000428124 247 ntBASIC4.5□□□□□ -1.69
SFTPBP07988 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.5□□□□□ -1.69
SFTPBP07988 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.5□□□□□ -1.69
SFTPBP07988 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.5□□□□□ -1.69
SFTPBP07988 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.5□□□□□ -1.69
SFTPBP07988 MTCO1P52-201ENST00000433928 531 ntBASIC4.5□□□□□ -1.69
SFTPBP07988 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.5□□□□□ -1.69
SFTPBP07988 RPS26P41-201ENST00000450370 284 ntBASIC4.5□□□□□ -1.69
SFTPBP07988 HMGB1P26-201ENST00000452520 628 ntBASIC4.5□□□□□ -1.69
SFTPBP07988 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.5□□□□□ -1.69
SFTPBP07988 AC005229.2-201ENST00000456995 399 ntBASIC4.5□□□□□ -1.69
SFTPBP07988 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.5□□□□□ -1.69
SFTPBP07988 RPL21P6-201ENST00000479171 504 ntBASIC4.5□□□□□ -1.69
SFTPBP07988 RN7SL423P-201ENST00000486202 304 ntBASIC4.5□□□□□ -1.69
SFTPBP07988 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.5□□□□□ -1.69
SFTPBP07988 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SFTPBP07988 NIFKP7-201ENST00000503365 834 ntBASIC4.5□□□□□ -1.69
SFTPBP07988 AC025459.1-201ENST00000504072 156 ntBASIC4.5□□□□□ -1.69
SFTPBP07988 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms