Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TPM3P06753 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TPM3P06753 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
TPM3P06753 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TPM3P06753 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.3□□□□□ -1.56
TPM3P06753 CXADRP1-201ENST00000398098 1095 ntBASIC5.3□□□□□ -1.56
TPM3P06753 AL357515.1-201ENST00000402967 542 ntBASIC5.3□□□□□ -1.56
TPM3P06753 RNA5SP104-201ENST00000410989 118 ntBASIC5.3□□□□□ -1.56
TPM3P06753 VN1R3-201ENST00000418822 919 ntBASIC5.3□□□□□ -1.56
TPM3P06753 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.3□□□□□ -1.56
TPM3P06753 NDUFA5P8-201ENST00000449019 346 ntBASIC5.3□□□□□ -1.56
TPM3P06753 RBMY2TP-201ENST00000451162 947 ntBASIC5.3□□□□□ -1.56
TPM3P06753 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.3□□□□□ -1.56
TPM3P06753 HMGN2P25-201ENST00000486956 268 ntBASIC5.3□□□□□ -1.56
TPM3P06753 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TPM3P06753 PPM1AP1-201ENST00000502740 1135 ntBASIC5.3□□□□□ -1.56
TPM3P06753 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.3□□□□□ -1.56
TPM3P06753 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.3□□□□□ -1.56
TPM3P06753 PGBD4P4-201ENST00000509673 613 ntBASIC5.3□□□□□ -1.56
TPM3P06753 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TPM3P06753 BX510359.5-201ENST00000515651 304 ntBASIC5.3□□□□□ -1.56
TPM3P06753 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.3□□□□□ -1.56
TPM3P06753 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.3□□□□□ -1.56
TPM3P06753 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.3□□□□□ -1.56
TPM3P06753 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.3□□□□□ -1.56
TPM3P06753 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.3□□□□□ -1.56
TPM3P06753 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TPM3P06753 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TPM3P06753 AC090312.1-201ENST00000580637 348 ntBASIC5.3□□□□□ -1.56
TPM3P06753 AC008521.2-201ENST00000591021 259 ntBASIC5.3□□□□□ -1.56
TPM3P06753 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.3□□□□□ -1.56
TPM3P06753 AL139041.1-201ENST00000605480 610 ntBASIC5.3□□□□□ -1.56
TPM3P06753 AC126175.1-201ENST00000617041 758 ntBASIC5.3□□□□□ -1.56
TPM3P06753 CXADRP3-202ENST00000617265 1100 ntBASIC5.3□□□□□ -1.56
TPM3P06753 AL357153.4-201ENST00000620487 1016 ntBASIC5.3□□□□□ -1.56
TPM3P06753 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.3□□□□□ -1.56
TPM3P06753 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.3□□□□□ -1.56
TPM3P06753 CASC19-264ENST00000641912 1184 ntBASIC5.3□□□□□ -1.56
TPM3P06753 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TPM3P06753 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TPM3P06753 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TPM3P06753 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TPM3P06753 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.3□□□□□ -1.56
TPM3P06753 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.3□□□□□ -1.56
TPM3P06753 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.29□□□□□ -1.56
TPM3P06753 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
TPM3P06753 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
TPM3P06753 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TPM3P06753 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TPM3P06753 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
TPM3P06753 RNA5SP52-201ENST00000362448 134 ntBASIC5.29□□□□□ -1.56
TPM3P06753 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TPM3P06753 RNU6-1320P-201ENST00000390838 107 ntBASIC5.29□□□□□ -1.56
TPM3P06753 RNU6-1269P-201ENST00000391139 107 ntBASIC5.29□□□□□ -1.56
TPM3P06753 DUTP5-201ENST00000406790 469 ntBASIC5.29□□□□□ -1.56
TPM3P06753 TBCAP2-201ENST00000416175 326 ntBASIC5.29□□□□□ -1.56
TPM3P06753 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.29□□□□□ -1.56
TPM3P06753 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.29□□□□□ -1.56
TPM3P06753 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.29□□□□□ -1.56
TPM3P06753 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TPM3P06753 RPS17P8-201ENST00000434525 335 ntBASIC5.29□□□□□ -1.56
TPM3P06753 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.29□□□□□ -1.56
TPM3P06753 FGF7P3-201ENST00000454645 303 ntBASIC5.29□□□□□ -1.56
TPM3P06753 RNU6-599P-201ENST00000459383 107 ntBASIC5.29□□□□□ -1.56
TPM3P06753 RNU6-1193P-201ENST00000459461 107 ntBASIC5.29□□□□□ -1.56
TPM3P06753 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.29□□□□□ -1.56
TPM3P06753 AC006499.6-201ENST00000511169 607 ntBASIC5.29□□□□□ -1.56
TPM3P06753 RNA5SP43-201ENST00000516559 110 ntBASIC5.29□□□□□ -1.56
TPM3P06753 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.29□□□□□ -1.56
TPM3P06753 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.29□□□□□ -1.56
TPM3P06753 FKBP1BP1-201ENST00000553366 325 ntBASIC5.29□□□□□ -1.56
TPM3P06753 HMGB3P26-201ENST00000560051 582 ntBASIC5.29□□□□□ -1.56
TPM3P06753 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.29□□□□□ -1.56
TPM3P06753 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.29□□□□□ -1.56
TPM3P06753 AL121932.1-201ENST00000605542 214 ntBASIC5.29□□□□□ -1.56
TPM3P06753 AC008966.2-201ENST00000606157 453 ntBASIC5.29□□□□□ -1.56
TPM3P06753 AC010424.2-201ENST00000607594 443 ntBASIC5.29□□□□□ -1.56
TPM3P06753 AL359513.1-201ENST00000614364 557 ntBASIC5.29□□□□□ -1.56
TPM3P06753 AL356752.1-201ENST00000615844 593 ntBASIC5.29□□□□□ -1.56
TPM3P06753 RNU6-368P-201ENST00000620928 107 ntBASIC5.29□□□□□ -1.56
TPM3P06753 RNU6-538P-201ENST00000622329 107 ntBASIC5.29□□□□□ -1.56
TPM3P06753 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TPM3P06753 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TPM3P06753 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.29□□□□□ -1.56
TPM3P06753 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.29□□□□□ -1.56
TPM3P06753 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TPM3P06753 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
TPM3P06753 AC112255.1-201ENST00000624070 2493 ntBASIC5.29□□□□□ -1.56
TPM3P06753 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TPM3P06753 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TPM3P06753 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.28□□□□□ -1.56
TPM3P06753 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
TPM3P06753 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TPM3P06753 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.28□□□□□ -1.56
TPM3P06753 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TPM3P06753 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.28□□□□□ -1.56
TPM3P06753 HSPD1P16-201ENST00000402302 394 ntBASIC5.28□□□□□ -1.56
TPM3P06753 ARL4AP5-201ENST00000404372 599 ntBASIC5.28□□□□□ -1.56
TPM3P06753 RN7SKP59-201ENST00000410520 314 ntBASIC5.28□□□□□ -1.56
TPM3P06753 RNA5SP345-201ENST00000410646 108 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms