Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AL139254.3-201ENST00000641097 674 ntBASIC6.05□□□□□ -1.44
COL5A2P05997 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL5A2P05997 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
COL5A2P05997 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
COL5A2P05997 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL5A2P05997 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL5A2P05997 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.05□□□□□ -1.44
COL5A2P05997 AC017104.4-201ENST00000636283 1592 ntBASIC6.05□□□□□ -1.44
COL5A2P05997 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL5A2P05997 AC133552.1-201ENST00000569988 4007 ntBASIC6.04□□□□□ -1.44
COL5A2P05997 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL5A2P05997 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COL5A2P05997 RPS27AP11-201ENST00000402798 447 ntBASIC6.04□□□□□ -1.44
COL5A2P05997 RNA5SP44-201ENST00000410446 133 ntBASIC6.04□□□□□ -1.44
COL5A2P05997 AC093166.2-201ENST00000455969 1017 ntBASIC6.04□□□□□ -1.44
COL5A2P05997 AC098799.3-201ENST00000506095 438 ntBASIC6.04□□□□□ -1.44
COL5A2P05997 SNORA67.7-201ENST00000516664 135 ntBASIC6.04□□□□□ -1.44
COL5A2P05997 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.04□□□□□ -1.44
COL5A2P05997 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.04□□□□□ -1.44
COL5A2P05997 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC6.04□□□□□ -1.44
COL5A2P05997 AC090515.3-201ENST00000560431 315 ntBASIC6.04□□□□□ -1.44
COL5A2P05997 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC6.04□□□□□ -1.44
COL5A2P05997 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.04□□□□□ -1.44
COL5A2P05997 AC113403.1-201ENST00000604910 193 ntBASIC6.04□□□□□ -1.44
COL5A2P05997 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
COL5A2P05997 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL5A2P05997 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL5A2P05997 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
COL5A2P05997 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC6.04□□□□□ -1.44
COL5A2P05997 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
COL5A2P05997 DNM1P47-203ENST00000571780 12667 ntBASIC6.04□□□□□ -1.44
COL5A2P05997 CPHL1P-201ENST00000461341 3407 ntBASIC6.04□□□□□ -1.44
COL5A2P05997 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL5A2P05997 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
COL5A2P05997 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A2P05997 RPL21P67-201ENST00000402896 478 ntBASIC6.03□□□□□ -1.44
COL5A2P05997 RCC2P2-201ENST00000422174 918 ntBASIC6.03□□□□□ -1.44
COL5A2P05997 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A2P05997 COX6CP15-201ENST00000426313 211 ntBASIC6.03□□□□□ -1.44
COL5A2P05997 NFYAP1-201ENST00000431953 972 ntBASIC6.03□□□□□ -1.44
COL5A2P05997 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC6.03□□□□□ -1.44
COL5A2P05997 RPS7P7-201ENST00000463499 571 ntBASIC6.03□□□□□ -1.44
COL5A2P05997 RN7SL691P-201ENST00000494487 301 ntBASIC6.03□□□□□ -1.44
COL5A2P05997 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC6.03□□□□□ -1.44
COL5A2P05997 NDUFB4P12-201ENST00000513465 390 ntBASIC6.03□□□□□ -1.44
COL5A2P05997 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A2P05997 MTCO1P49-201ENST00000523429 802 ntBASIC6.03□□□□□ -1.44
COL5A2P05997 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
COL5A2P05997 AC010547.7-201ENST00000570323 333 ntBASIC6.03□□□□□ -1.44
COL5A2P05997 AC053481.3-201ENST00000577881 843 ntBASIC6.03□□□□□ -1.44
COL5A2P05997 MIR4444-1-201ENST00000581696 74 ntBASIC6.03□□□□□ -1.44
COL5A2P05997 MIR4444-2-201ENST00000584390 74 ntBASIC6.03□□□□□ -1.44
COL5A2P05997 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.03□□□□□ -1.44
COL5A2P05997 RPL7P50-201ENST00000600588 727 ntBASIC6.03□□□□□ -1.44
COL5A2P05997 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.03□□□□□ -1.44
COL5A2P05997 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.03□□□□□ -1.44
COL5A2P05997 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC6.03□□□□□ -1.44
COL5A2P05997 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
COL5A2P05997 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.03□□□□□ -1.44
COL5A2P05997 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
COL5A2P05997 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A2P05997 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.03□□□□□ -1.44
COL5A2P05997 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A2P05997 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A2P05997 LARP1BP1-201ENST00000506036 1359 ntBASIC6.03□□□□□ -1.44
COL5A2P05997 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
COL5A2P05997 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A2P05997 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A2P05997 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL5A2P05997 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
COL5A2P05997 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.02□□□□□ -1.44
COL5A2P05997 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
COL5A2P05997 AL161909.1-201ENST00000397390 712 ntBASIC6.02□□□□□ -1.44
COL5A2P05997 RPL5P12-201ENST00000477071 851 ntBASIC6.02□□□□□ -1.44
COL5A2P05997 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
COL5A2P05997 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC6.02□□□□□ -1.44
COL5A2P05997 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC6.02□□□□□ -1.44
COL5A2P05997 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6.02□□□□□ -1.44
COL5A2P05997 RN7SL703P-201ENST00000578485 302 ntBASIC6.02□□□□□ -1.44
COL5A2P05997 MIR3158-1-201ENST00000583596 81 ntBASIC6.02□□□□□ -1.44
COL5A2P05997 IGKV2OR2-2-201ENST00000605025 300 ntBASIC6.02□□□□□ -1.44
COL5A2P05997 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6.02□□□□□ -1.44
COL5A2P05997 MIR6891-201ENST00000618788 93 ntBASIC6.02□□□□□ -1.44
COL5A2P05997 AC140479.6-201ENST00000633535 357 ntBASIC6.02□□□□□ -1.44
COL5A2P05997 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.44
COL5A2P05997 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
COL5A2P05997 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL5A2P05997 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL5A2P05997 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC6.02□□□□□ -1.45
COL5A2P05997 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL5A2P05997 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL5A2P05997 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.02□□□□□ -1.45
COL5A2P05997 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
COL5A2P05997 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL5A2P05997 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL5A2P05997 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC6.02□□□□□ -1.45
COL5A2P05997 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL5A2P05997 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC6.02□□□□□ -1.45
COL5A2P05997 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
COL5A2P05997 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms