Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL020997.2-201ENST00000602607 184 ntBASIC5.48□□□□□ -1.53
COL4A1P02462 MIR6867-201ENST00000610636 67 ntBASIC5.48□□□□□ -1.53
COL4A1P02462 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL4A1P02462 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.48□□□□□ -1.53
COL4A1P02462 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL4A1P02462 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.48□□□□□ -1.53
COL4A1P02462 AC005261.4-201ENST00000600047 1385 ntBASIC5.48□□□□□ -1.53
COL4A1P02462 OR51H2P-202ENST00000641424 3046 ntBASIC5.48□□□□□ -1.53
COL4A1P02462 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
COL4A1P02462 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL4A1P02462 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.48□□□□□ -1.53
COL4A1P02462 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A1P02462 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A1P02462 COX6CP15-201ENST00000426313 211 ntBASIC5.47□□□□□ -1.53
COL4A1P02462 AL132765.1-201ENST00000434165 553 ntBASIC5.47□□□□□ -1.53
COL4A1P02462 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.47□□□□□ -1.53
COL4A1P02462 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.47□□□□□ -1.53
COL4A1P02462 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.47□□□□□ -1.53
COL4A1P02462 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.47□□□□□ -1.53
COL4A1P02462 AC022916.3-201ENST00000592961 742 ntBASIC5.47□□□□□ -1.53
COL4A1P02462 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.47□□□□□ -1.53
COL4A1P02462 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.47□□□□□ -1.53
COL4A1P02462 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A1P02462 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
COL4A1P02462 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A1P02462 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
COL4A1P02462 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.47□□□□□ -1.53
COL4A1P02462 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A1P02462 AL672167.1-204ENST00000641875 3017 ntBASIC5.47□□□□□ -1.53
COL4A1P02462 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.47□□□□□ -1.53
COL4A1P02462 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A1P02462 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A1P02462 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A1P02462 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.47□□□□□ -1.53
COL4A1P02462 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A1P02462 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.47□□□□□ -1.53
COL4A1P02462 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A1P02462 RNA5SP388-201ENST00000362584 119 ntBASIC5.47□□□□□ -1.53
COL4A1P02462 RNU1-63P-201ENST00000383902 164 ntBASIC5.47□□□□□ -1.53
COL4A1P02462 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.47□□□□□ -1.53
COL4A1P02462 RPS27AP17-201ENST00000463344 455 ntBASIC5.47□□□□□ -1.53
COL4A1P02462 AC020890.1-201ENST00000491837 504 ntBASIC5.47□□□□□ -1.53
COL4A1P02462 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.47□□□□□ -1.53
COL4A1P02462 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.47□□□□□ -1.53
COL4A1P02462 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.47□□□□□ -1.53
COL4A1P02462 AC010201.1-201ENST00000605051 540 ntBASIC5.47□□□□□ -1.53
COL4A1P02462 AC006065.6-201ENST00000625201 545 ntBASIC5.47□□□□□ -1.53
COL4A1P02462 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
COL4A1P02462 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC5.47□□□□□ -1.53
COL4A1P02462 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
COL4A1P02462 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL4A1P02462 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL4A1P02462 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
COL4A1P02462 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL4A1P02462 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL4A1P02462 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.46□□□□□ -1.54
COL4A1P02462 TRGV7-201ENST00000427089 353 ntBASIC5.46□□□□□ -1.54
COL4A1P02462 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.46□□□□□ -1.54
COL4A1P02462 AC020593.1-201ENST00000507399 299 ntBASIC5.46□□□□□ -1.54
COL4A1P02462 RNA5SP446-201ENST00000515955 82 ntBASIC5.46□□□□□ -1.54
COL4A1P02462 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.46□□□□□ -1.54
COL4A1P02462 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.46□□□□□ -1.54
COL4A1P02462 AC023762.1-201ENST00000603280 584 ntBASIC5.46□□□□□ -1.54
COL4A1P02462 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL4A1P02462 TET1P1-201ENST00000426627 2301 ntBASIC5.46□□□□□ -1.54
COL4A1P02462 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.46□□□□□ -1.54
COL4A1P02462 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL4A1P02462 AC100871.1-201ENST00000507871 1456 ntBASIC5.45□□□□□ -1.54
COL4A1P02462 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A1P02462 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A1P02462 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A1P02462 Z95114.1-201ENST00000624264 14574 ntBASIC5.45□□□□□ -1.54
COL4A1P02462 SPRR2C-201ENST00000290702 219 ntBASIC5.45□□□□□ -1.54
COL4A1P02462 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
COL4A1P02462 RNA5SP283-201ENST00000365604 119 ntBASIC5.45□□□□□ -1.54
COL4A1P02462 SDHCP2-201ENST00000398565 501 ntBASIC5.45□□□□□ -1.54
COL4A1P02462 AL050305.1-201ENST00000399993 1230 ntBASIC5.45□□□□□ -1.54
COL4A1P02462 RN7SKP33-201ENST00000410942 340 ntBASIC5.45□□□□□ -1.54
COL4A1P02462 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.45□□□□□ -1.54
COL4A1P02462 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.45□□□□□ -1.54
COL4A1P02462 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.45□□□□□ -1.54
COL4A1P02462 AL389915.1-201ENST00000422463 466 ntBASIC5.45□□□□□ -1.54
COL4A1P02462 YY1P1-201ENST00000427625 668 ntBASIC5.45□□□□□ -1.54
COL4A1P02462 RPL21P91-201ENST00000429231 479 ntBASIC5.45□□□□□ -1.54
COL4A1P02462 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.45□□□□□ -1.54
COL4A1P02462 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.45□□□□□ -1.54
COL4A1P02462 AC004938.1-201ENST00000438468 308 ntBASIC5.45□□□□□ -1.54
COL4A1P02462 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.45□□□□□ -1.54
COL4A1P02462 RPL35P6-201ENST00000490024 372 ntBASIC5.45□□□□□ -1.54
COL4A1P02462 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.45□□□□□ -1.54
COL4A1P02462 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
COL4A1P02462 RNA5SP230-201ENST00000517039 122 ntBASIC5.45□□□□□ -1.54
COL4A1P02462 BPIFA4P-203ENST00000603168 689 ntBASIC5.45□□□□□ -1.54
COL4A1P02462 MIR3653-201ENST00000625572 110 ntBASIC5.45□□□□□ -1.54
COL4A1P02462 AC139769.1-204ENST00000472297 1931 ntBASIC5.45□□□□□ -1.54
COL4A1P02462 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.45□□□□□ -1.54
COL4A1P02462 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
COL4A1P02462 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A1P02462 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A1P02462 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms