Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL1A1P02452 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL1A1P02452 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL1A1P02452 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
COL1A1P02452 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.58□□□□□ -1.52
COL1A1P02452 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL1A1P02452 RPL7P32-201ENST00000457119 744 ntBASIC5.58□□□□□ -1.52
COL1A1P02452 SNORA70.11-201ENST00000515987 138 ntBASIC5.58□□□□□ -1.52
COL1A1P02452 SNORA70.13-201ENST00000516116 138 ntBASIC5.58□□□□□ -1.52
COL1A1P02452 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL1A1P02452 AC084824.1-201ENST00000550917 1005 ntBASIC5.58□□□□□ -1.52
COL1A1P02452 AC087477.6-201ENST00000559595 843 ntBASIC5.58□□□□□ -1.52
COL1A1P02452 AC093227.2-201ENST00000589357 285 ntBASIC5.58□□□□□ -1.52
COL1A1P02452 BNIP3P33-201ENST00000598912 569 ntBASIC5.58□□□□□ -1.52
COL1A1P02452 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.58□□□□□ -1.52
COL1A1P02452 VN1R85P-201ENST00000601587 426 ntBASIC5.58□□□□□ -1.52
COL1A1P02452 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.58□□□□□ -1.52
COL1A1P02452 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL1A1P02452 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
COL1A1P02452 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL1A1P02452 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
COL1A1P02452 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
COL1A1P02452 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL1A1P02452 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL1A1P02452 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL1A1P02452 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.58□□□□□ -1.52
COL1A1P02452 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL1A1P02452 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL1A1P02452 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL1A1P02452 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC5.58□□□□□ -1.52
COL1A1P02452 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL1A1P02452 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
COL1A1P02452 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL1A1P02452 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL1A1P02452 RAD23BP1-201ENST00000421404 1227 ntBASIC5.58□□□□□ -1.52
COL1A1P02452 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.58□□□□□ -1.52
COL1A1P02452 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.58□□□□□ -1.52
COL1A1P02452 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.58□□□□□ -1.52
COL1A1P02452 AC023424.1-201ENST00000496058 459 ntBASIC5.58□□□□□ -1.52
COL1A1P02452 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.58□□□□□ -1.52
COL1A1P02452 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.58□□□□□ -1.52
COL1A1P02452 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.58□□□□□ -1.52
COL1A1P02452 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL1A1P02452 AC010503.3-201ENST00000594355 540 ntBASIC5.58□□□□□ -1.52
COL1A1P02452 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL1A1P02452 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
COL1A1P02452 ICE2P1-201ENST00000512800 1849 ntBASIC5.57□□□□□ -1.52
COL1A1P02452 DDX18P5-201ENST00000534547 1306 ntBASIC5.57□□□□□ -1.52
COL1A1P02452 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL1A1P02452 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
COL1A1P02452 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.57□□□□□ -1.52
COL1A1P02452 IQCB2P-201ENST00000401788 1633 ntBASIC5.57□□□□□ -1.52
COL1A1P02452 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL1A1P02452 RNU1-130P-201ENST00000363930 160 ntBASIC5.57□□□□□ -1.52
COL1A1P02452 OR1F12-201ENST00000402365 945 ntBASIC5.57□□□□□ -1.52
COL1A1P02452 BX119904.3-201ENST00000428194 957 ntBASIC5.57□□□□□ -1.52
COL1A1P02452 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.57□□□□□ -1.52
COL1A1P02452 ACTR3P2-201ENST00000439585 1257 ntBASIC5.57□□□□□ -1.52
COL1A1P02452 RPL23AP93-201ENST00000440847 484 ntBASIC5.57□□□□□ -1.52
COL1A1P02452 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.57□□□□□ -1.52
COL1A1P02452 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.57□□□□□ -1.52
COL1A1P02452 NPM1P28-201ENST00000492269 840 ntBASIC5.57□□□□□ -1.52
COL1A1P02452 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.57□□□□□ -1.52
COL1A1P02452 IGLVIV-65-201ENST00000517313 360 ntBASIC5.57□□□□□ -1.52
COL1A1P02452 AC007224.1-201ENST00000564410 144 ntBASIC5.57□□□□□ -1.52
COL1A1P02452 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.57□□□□□ -1.52
COL1A1P02452 AC005899.7-201ENST00000618199 588 ntBASIC5.57□□□□□ -1.52
COL1A1P02452 AP005019.3-201ENST00000620418 560 ntBASIC5.57□□□□□ -1.52
COL1A1P02452 AC009120.7-201ENST00000623452 780 ntBASIC5.57□□□□□ -1.52
COL1A1P02452 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.57□□□□□ -1.52
COL1A1P02452 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
COL1A1P02452 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.57□□□□□ -1.52
COL1A1P02452 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL1A1P02452 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL1A1P02452 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL1A1P02452 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
COL1A1P02452 AL445487.1-201ENST00000415694 1580 ntBASIC5.56□□□□□ -1.52
COL1A1P02452 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL1A1P02452 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.56□□□□□ -1.52
COL1A1P02452 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL1A1P02452 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL1A1P02452 SNORA70C-201ENST00000384538 135 ntBASIC5.56□□□□□ -1.52
COL1A1P02452 SDHCP2-201ENST00000398565 501 ntBASIC5.56□□□□□ -1.52
COL1A1P02452 ST13P16-201ENST00000401760 781 ntBASIC5.56□□□□□ -1.52
COL1A1P02452 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL1A1P02452 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL1A1P02452 HMGN2P27-201ENST00000427352 270 ntBASIC5.56□□□□□ -1.52
COL1A1P02452 AP001324.1-201ENST00000428553 399 ntBASIC5.56□□□□□ -1.52
COL1A1P02452 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.56□□□□□ -1.52
COL1A1P02452 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.56□□□□□ -1.52
COL1A1P02452 CYCSP34-201ENST00000458172 304 ntBASIC5.56□□□□□ -1.52
COL1A1P02452 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.56□□□□□ -1.52
COL1A1P02452 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.56□□□□□ -1.52
COL1A1P02452 AC106806.2-201ENST00000509365 500 ntBASIC5.56□□□□□ -1.52
COL1A1P02452 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.56□□□□□ -1.52
COL1A1P02452 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.56□□□□□ -1.52
COL1A1P02452 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.56□□□□□ -1.52
COL1A1P02452 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.56□□□□□ -1.52
COL1A1P02452 MRPL49P2-201ENST00000521066 465 ntBASIC5.56□□□□□ -1.52
COL1A1P02452 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms