Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC008147.3-201ENST00000548666 354 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 AC022404.1-201ENST00000555320 273 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 AC027281.1-201ENST00000574178 758 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 HMGB2P1-201ENST00000591146 634 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 AC130352.1-201ENST00000602979 661 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 FO393422.1-201ENST00000603908 708 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 AC004241.3-201ENST00000611728 517 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 AC126175.1-201ENST00000617041 758 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 AC023509.5-201ENST00000617434 807 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 HOTTIP_3.1-201ENST00000619957 337 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 AC132068.1-201ENST00000623805 459 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 AC006453.5-201ENST00000636451 619 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 ALB-209ENST00000503124 1741 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 RNA5SP52-201ENST00000362448 134 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 RHOT1P2-201ENST00000366423 333 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 GCNT6-201ENST00000379591 934 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 MIR93-201ENST00000385024 80 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AL021331.1-201ENST00000402817 582 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 RNU6-564P-201ENST00000410983 104 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AL513325.1-201ENST00000417716 1034 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AC004552.1-201ENST00000419089 348 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 VN1R37P-201ENST00000419096 748 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 Z74021.1-201ENST00000423610 407 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AJ239321.1-201ENST00000424255 564 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AC097523.2-201ENST00000435551 652 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 XKRYP6-201ENST00000440468 1116 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AL353748.1-201ENST00000440753 474 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 XKRYP3-201ENST00000442113 1116 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 HMGB1P4-201ENST00000455362 567 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 RPS26P3-201ENST00000470205 348 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AC100832.1-201ENST00000471945 383 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AC008410.1-201ENST00000483777 339 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AC090543.2-201ENST00000483963 348 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AC004057.1-201ENST00000485827 348 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AK4P6-201ENST00000505168 528 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AC022784.5-201ENST00000522241 437 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 MTND2P13-201ENST00000577438 1039 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 RPL7P50-201ENST00000600588 727 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AC005520.3-201ENST00000602874 370 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AL137072.1-201ENST00000603444 466 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AC096553.1-201ENST00000605169 829 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AC026124.2-201ENST00000621847 656 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 OR13C1P-202ENST00000641378 2919 ntBASIC3.64□□□□□ -1.83
HLA-DQA1P01909 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DQA1P01909 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC3.63□□□□□ -1.83
HLA-DQA1P01909 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DQA1P01909 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms