Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 OR6K4P-201ENST00000423179 955 ntBASIC5.1□□□□□ -1.59
PDGFBP01127 RPL7P57-201ENST00000423238 740 ntBASIC5.1□□□□□ -1.59
PDGFBP01127 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.1□□□□□ -1.59
PDGFBP01127 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.1□□□□□ -1.59
PDGFBP01127 AC022022.1-201ENST00000430304 178 ntBASIC5.1□□□□□ -1.59
PDGFBP01127 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.1□□□□□ -1.59
PDGFBP01127 AP000936.3-201ENST00000438127 255 ntBASIC5.1□□□□□ -1.59
PDGFBP01127 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.1□□□□□ -1.59
PDGFBP01127 AL035551.1-201ENST00000446931 348 ntBASIC5.1□□□□□ -1.59
PDGFBP01127 AL354714.3-201ENST00000447284 493 ntBASIC5.1□□□□□ -1.59
PDGFBP01127 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.1□□□□□ -1.59
PDGFBP01127 AC037198.2-201ENST00000478845 733 ntBASIC5.1□□□□□ -1.59
PDGFBP01127 AC091167.1-201ENST00000492017 396 ntBASIC5.1□□□□□ -1.59
PDGFBP01127 OR52A4P-203ENST00000498233 1014 ntBASIC5.1□□□□□ -1.59
PDGFBP01127 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
PDGFBP01127 AC093840.1-201ENST00000511599 336 ntBASIC5.1□□□□□ -1.59
PDGFBP01127 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.1□□□□□ -1.59
PDGFBP01127 AC012339.2-201ENST00000523996 453 ntBASIC5.1□□□□□ -1.59
PDGFBP01127 OR4A43P-201ENST00000532938 908 ntBASIC5.1□□□□□ -1.59
PDGFBP01127 CYCSP29-201ENST00000533731 318 ntBASIC5.1□□□□□ -1.59
PDGFBP01127 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PDGFBP01127 AL137072.1-201ENST00000603444 466 ntBASIC5.1□□□□□ -1.59
PDGFBP01127 AC107308.1-201ENST00000615897 301 ntBASIC5.1□□□□□ -1.59
PDGFBP01127 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFBP01127 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.1□□□□□ -1.59
PDGFBP01127 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFBP01127 AC092159.4-201ENST00000624944 550 ntBASIC5.1□□□□□ -1.59
PDGFBP01127 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.1□□□□□ -1.59
PDGFBP01127 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.1□□□□□ -1.59
PDGFBP01127 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFBP01127 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFBP01127 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFBP01127 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDGFBP01127 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDGFBP01127 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
PDGFBP01127 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDGFBP01127 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDGFBP01127 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDGFBP01127 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDGFBP01127 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDGFBP01127 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDGFBP01127 ZNF652P1-201ENST00000442420 1309 ntBASIC5.09□□□□□ -1.59
PDGFBP01127 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PDGFBP01127 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDGFBP01127 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDGFBP01127 RNA5SP28-201ENST00000363841 119 ntBASIC5.09□□□□□ -1.59
PDGFBP01127 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.09□□□□□ -1.59
PDGFBP01127 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.09□□□□□ -1.59
PDGFBP01127 AC233289.1-201ENST00000403700 508 ntBASIC5.09□□□□□ -1.59
PDGFBP01127 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.09□□□□□ -1.59
PDGFBP01127 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.09□□□□□ -1.59
PDGFBP01127 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.09□□□□□ -1.59
PDGFBP01127 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.09□□□□□ -1.59
PDGFBP01127 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDGFBP01127 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.09□□□□□ -1.59
PDGFBP01127 OR10T1P-201ENST00000424327 947 ntBASIC5.09□□□□□ -1.59
PDGFBP01127 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.09□□□□□ -1.59
PDGFBP01127 RPS27AP12-201ENST00000429552 465 ntBASIC5.09□□□□□ -1.59
PDGFBP01127 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.09□□□□□ -1.59
PDGFBP01127 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.09□□□□□ -1.59
PDGFBP01127 AL359073.1-201ENST00000448036 403 ntBASIC5.09□□□□□ -1.59
PDGFBP01127 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.09□□□□□ -1.59
PDGFBP01127 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.09□□□□□ -1.59
PDGFBP01127 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.09□□□□□ -1.59
PDGFBP01127 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.09□□□□□ -1.59
PDGFBP01127 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.09□□□□□ -1.59
PDGFBP01127 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.09□□□□□ -1.59
PDGFBP01127 AC068831.4-201ENST00000556118 109 ntBASIC5.09□□□□□ -1.59
PDGFBP01127 NPM1P42-201ENST00000560329 862 ntBASIC5.09□□□□□ -1.59
PDGFBP01127 BMS1P7-201ENST00000602440 1052 ntBASIC5.09□□□□□ -1.59
PDGFBP01127 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.09□□□□□ -1.59
PDGFBP01127 AC034236.3-201ENST00000605999 461 ntBASIC5.09□□□□□ -1.59
PDGFBP01127 AC093388.1-201ENST00000609166 430 ntBASIC5.09□□□□□ -1.59
PDGFBP01127 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.09□□□□□ -1.59
PDGFBP01127 AP003499.2-201ENST00000624100 483 ntBASIC5.09□□□□□ -1.59
PDGFBP01127 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.09□□□□□ -1.59
PDGFBP01127 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.09□□□□□ -1.59
PDGFBP01127 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDGFBP01127 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.09□□□□□ -1.59
PDGFBP01127 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDGFBP01127 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.09□□□□□ -1.59
PDGFBP01127 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
PDGFBP01127 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
PDGFBP01127 BCORP1-203ENST00000513194 5093 ntBASIC5.09□□□□□ -1.6
PDGFBP01127 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PDGFBP01127 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
PDGFBP01127 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
PDGFBP01127 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
PDGFBP01127 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PDGFBP01127 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFBP01127 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFBP01127 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PDGFBP01127 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.08□□□□□ -1.6
PDGFBP01127 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.08□□□□□ -1.6
PDGFBP01127 MAPK10-263ENST00000641052 4307 ntBASIC5.08□□□□□ -1.6
PDGFBP01127 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.08□□□□□ -1.6
PDGFBP01127 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
PDGFBP01127 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFBP01127 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
PDGFBP01127 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms