Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.67□□□□□ -1.66
CLDN9O95484 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
CLDN9O95484 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN9O95484 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.67□□□□□ -1.66
CLDN9O95484 MIR365B-201ENST00000362317 111 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.67□□□□□ -1.66
CLDN9O95484 AC104297.1-201ENST00000393779 870 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 HMGB3P7-201ENST00000400214 611 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 AL592291.1-201ENST00000403830 352 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 MIR1271-201ENST00000408537 86 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN9O95484 VN1R37P-201ENST00000419096 748 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 AC093162.1-201ENST00000419682 124 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.67□□□□□ -1.66
CLDN9O95484 EIF4A1P1-201ENST00000420241 934 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN9O95484 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.67□□□□□ -1.66
CLDN9O95484 RPS17P8-201ENST00000434525 335 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 RPL7P11-201ENST00000437586 658 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 EEF1B2P5-201ENST00000444820 548 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.67□□□□□ -1.66
CLDN9O95484 HSPE1P22-201ENST00000456856 327 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.67□□□□□ -1.66
CLDN9O95484 AC005532.2-201ENST00000467154 373 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 AC112206.1-201ENST00000468416 477 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 RPL32P9-201ENST00000487963 407 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 RN7SL591P-201ENST00000496150 292 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN9O95484 AC006499.3-201ENST00000506077 748 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN9O95484 RFPL4AP5-201ENST00000514977 504 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN9O95484 RNA5SP392-201ENST00000516905 112 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN9O95484 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.67□□□□□ -1.66
CLDN9O95484 OR10G5P-201ENST00000532733 358 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN9O95484 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CLDN9O95484 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.67□□□□□ -1.66
CLDN9O95484 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.67□□□□□ -1.66
CLDN9O95484 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.67□□□□□ -1.66
CLDN9O95484 AL445222.1-201ENST00000607259 628 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 AC211433.2-201ENST00000608433 387 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 AL592494.3-201ENST00000609485 464 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 AC015722.2-201ENST00000622210 551 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.67□□□□□ -1.66
CLDN9O95484 TMEM30CP-203ENST00000637814 1035 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.67□□□□□ -1.66
CLDN9O95484 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN9O95484 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN9O95484 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN9O95484 SALL4P2-201ENST00000423288 2910 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.67□□□□□ -1.66
CLDN9O95484 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.67□□□□□ -1.66
CLDN9O95484 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN9O95484 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN9O95484 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN9O95484 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLDN9O95484 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CLDN9O95484 BTBD10P1-201ENST00000549824 1352 ntBASIC4.66□□□□□ -1.66
CLDN9O95484 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN9O95484 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CLDN9O95484 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.66□□□□□ -1.66
CLDN9O95484 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN9O95484 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN9O95484 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN9O95484 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLDN9O95484 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLDN9O95484 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLDN9O95484 RNU4-44P-201ENST00000363050 141 ntBASIC4.66□□□□□ -1.66
CLDN9O95484 MIR765-201ENST00000390226 114 ntBASIC4.66□□□□□ -1.66
CLDN9O95484 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLDN9O95484 AL359643.1-201ENST00000404109 423 ntBASIC4.66□□□□□ -1.66
CLDN9O95484 SPTLC1P2-201ENST00000407089 121 ntBASIC4.66□□□□□ -1.66
CLDN9O95484 RN7SKP125-201ENST00000410481 302 ntBASIC4.66□□□□□ -1.66
CLDN9O95484 CASKP1-201ENST00000412870 582 ntBASIC4.66□□□□□ -1.66
CLDN9O95484 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.66□□□□□ -1.66
CLDN9O95484 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.66□□□□□ -1.66
CLDN9O95484 AC007394.1-201ENST00000421941 531 ntBASIC4.66□□□□□ -1.66
CLDN9O95484 AL355994.1-201ENST00000424379 260 ntBASIC4.66□□□□□ -1.66
CLDN9O95484 RPL34P6-201ENST00000432390 345 ntBASIC4.66□□□□□ -1.66
CLDN9O95484 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.66□□□□□ -1.66
CLDN9O95484 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.66□□□□□ -1.66
CLDN9O95484 RAB28P3-201ENST00000448325 597 ntBASIC4.66□□□□□ -1.66
CLDN9O95484 AC073850.1-201ENST00000449243 255 ntBASIC4.66□□□□□ -1.66
CLDN9O95484 SLC25A18P1-201ENST00000449385 454 ntBASIC4.66□□□□□ -1.66
CLDN9O95484 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLDN9O95484 TPT1P1-201ENST00000458495 518 ntBASIC4.66□□□□□ -1.66
CLDN9O95484 RPL37AP8-201ENST00000494116 276 ntBASIC4.66□□□□□ -1.66
CLDN9O95484 AC093890.1-201ENST00000502554 540 ntBASIC4.66□□□□□ -1.66
CLDN9O95484 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.66□□□□□ -1.66
CLDN9O95484 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.66□□□□□ -1.66
CLDN9O95484 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.66□□□□□ -1.66
CLDN9O95484 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.66□□□□□ -1.66
CLDN9O95484 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.66□□□□□ -1.66
CLDN9O95484 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.66□□□□□ -1.66
CLDN9O95484 BNIP3P32-201ENST00000600015 554 ntBASIC4.66□□□□□ -1.66
CLDN9O95484 RNF138P2-201ENST00000603490 592 ntBASIC4.66□□□□□ -1.66
CLDN9O95484 GMCL1P2-201ENST00000605230 823 ntBASIC4.66□□□□□ -1.66
CLDN9O95484 AC022106.2-201ENST00000620114 757 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms