Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN3O15551 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.27□□□□□ -1.57
CLDN3O15551 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN3O15551 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
CLDN3O15551 AC023424.1-201ENST00000496058 459 ntBASIC5.27□□□□□ -1.57
CLDN3O15551 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN3O15551 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.27□□□□□ -1.57
CLDN3O15551 OR7H2P-201ENST00000513483 306 ntBASIC5.27□□□□□ -1.57
CLDN3O15551 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN3O15551 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.27□□□□□ -1.57
CLDN3O15551 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN3O15551 AC005868.1-201ENST00000536421 331 ntBASIC5.27□□□□□ -1.57
CLDN3O15551 AC122134.1-201ENST00000565664 1104 ntBASIC5.27□□□□□ -1.57
CLDN3O15551 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CLDN3O15551 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.27□□□□□ -1.57
CLDN3O15551 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CLDN3O15551 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN3O15551 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN3O15551 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN3O15551 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN3O15551 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.26□□□□□ -1.57
CLDN3O15551 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN3O15551 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CLDN3O15551 AL606537.1-201ENST00000607258 2011 ntBASIC5.26□□□□□ -1.57
CLDN3O15551 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN3O15551 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN3O15551 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
CLDN3O15551 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN3O15551 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN3O15551 TLK1P1-201ENST00000456760 2440 ntBASIC5.26□□□□□ -1.57
CLDN3O15551 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN3O15551 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN3O15551 RN7SKP100-201ENST00000411258 284 ntBASIC5.26□□□□□ -1.57
CLDN3O15551 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN3O15551 LINC00993-201ENST00000420453 540 ntBASIC5.26□□□□□ -1.57
CLDN3O15551 OR2AH1P-201ENST00000425717 928 ntBASIC5.26□□□□□ -1.57
CLDN3O15551 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.26□□□□□ -1.57
CLDN3O15551 OR2B7P-201ENST00000429302 934 ntBASIC5.26□□□□□ -1.57
CLDN3O15551 AL451139.1-201ENST00000434718 346 ntBASIC5.26□□□□□ -1.57
CLDN3O15551 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN3O15551 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN3O15551 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN3O15551 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN3O15551 OR7L1P-201ENST00000456181 380 ntBASIC5.26□□□□□ -1.57
CLDN3O15551 AC105918.1-201ENST00000474399 838 ntBASIC5.26□□□□□ -1.57
CLDN3O15551 AC104971.1-201ENST00000495117 578 ntBASIC5.26□□□□□ -1.57
CLDN3O15551 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CLDN3O15551 HMGB3P16-201ENST00000508037 287 ntBASIC5.26□□□□□ -1.57
CLDN3O15551 RN7SKP276-201ENST00000516242 268 ntBASIC5.26□□□□□ -1.57
CLDN3O15551 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN3O15551 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN3O15551 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CLDN3O15551 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN3O15551 AC008147.3-201ENST00000548666 354 ntBASIC5.26□□□□□ -1.57
CLDN3O15551 AC133555.2-201ENST00000550213 292 ntBASIC5.26□□□□□ -1.57
CLDN3O15551 RN7SL802P-201ENST00000577858 299 ntBASIC5.26□□□□□ -1.57
CLDN3O15551 AC091042.1-201ENST00000579213 173 ntBASIC5.26□□□□□ -1.57
CLDN3O15551 MIR4472-2-201ENST00000582069 67 ntBASIC5.26□□□□□ -1.57
CLDN3O15551 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN3O15551 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN3O15551 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN3O15551 AC138473.1-201ENST00000605717 526 ntBASIC5.26□□□□□ -1.57
CLDN3O15551 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN3O15551 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN3O15551 AC012414.7-202ENST00000622705 1090 ntBASIC5.26□□□□□ -1.57
CLDN3O15551 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN3O15551 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.26□□□□□ -1.57
CLDN3O15551 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN3O15551 SMG1P6-201ENST00000532337 2930 ntBASIC5.26□□□□□ -1.57
CLDN3O15551 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.26□□□□□ -1.57
CLDN3O15551 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.26□□□□□ -1.57
CLDN3O15551 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN3O15551 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN3O15551 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CLDN3O15551 OR10AB1P-202ENST00000641219 1686 ntBASIC5.25□□□□□ -1.57
CLDN3O15551 RBPJP2-201ENST00000618187 1444 ntBASIC5.25□□□□□ -1.57
CLDN3O15551 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.25□□□□□ -1.57
CLDN3O15551 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.25□□□□□ -1.57
CLDN3O15551 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.25□□□□□ -1.57
CLDN3O15551 RNA5SP105-201ENST00000391123 113 ntBASIC5.25□□□□□ -1.57
CLDN3O15551 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.25□□□□□ -1.57
CLDN3O15551 RNA5SP296-201ENST00000410523 111 ntBASIC5.25□□□□□ -1.57
CLDN3O15551 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.25□□□□□ -1.57
CLDN3O15551 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.25□□□□□ -1.57
CLDN3O15551 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.25□□□□□ -1.57
CLDN3O15551 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.25□□□□□ -1.57
CLDN3O15551 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.25□□□□□ -1.57
CLDN3O15551 Z80107.2-201ENST00000445127 392 ntBASIC5.25□□□□□ -1.57
CLDN3O15551 AC002553.2-201ENST00000453217 340 ntBASIC5.25□□□□□ -1.57
CLDN3O15551 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.25□□□□□ -1.57
CLDN3O15551 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.25□□□□□ -1.57
CLDN3O15551 ENPP7P9-201ENST00000514456 627 ntBASIC5.25□□□□□ -1.57
CLDN3O15551 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.25□□□□□ -1.57
CLDN3O15551 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.25□□□□□ -1.57
CLDN3O15551 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.25□□□□□ -1.57
CLDN3O15551 AL390334.1-201ENST00000556395 450 ntBASIC5.25□□□□□ -1.57
CLDN3O15551 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.25□□□□□ -1.57
CLDN3O15551 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.25□□□□□ -1.57
CLDN3O15551 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.25□□□□□ -1.57
CLDN3O15551 MIR5699-201ENST00000578903 90 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms