Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.79□□□□□ -1.32
SOX1O00570 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC6.79□□□□□ -1.32
SOX1O00570 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC6.79□□□□□ -1.32
SOX1O00570 PSPHP1-201ENST00000450062 261 ntBASIC6.79□□□□□ -1.32
SOX1O00570 HSPE1P22-201ENST00000456856 327 ntBASIC6.79□□□□□ -1.32
SOX1O00570 AC109462.1-201ENST00000491087 368 ntBASIC6.79□□□□□ -1.32
SOX1O00570 STMN1P2-201ENST00000508435 439 ntBASIC6.79□□□□□ -1.32
SOX1O00570 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC6.79□□□□□ -1.32
SOX1O00570 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.79□□□□□ -1.32
SOX1O00570 AC084337.1-201ENST00000524809 686 ntBASIC6.79□□□□□ -1.32
SOX1O00570 OR5AK1P-201ENST00000524837 922 ntBASIC6.79□□□□□ -1.32
SOX1O00570 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SOX1O00570 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.79□□□□□ -1.32
SOX1O00570 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC6.79□□□□□ -1.32
SOX1O00570 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC6.79□□□□□ -1.32
SOX1O00570 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC6.79□□□□□ -1.32
SOX1O00570 RPL10P14-201ENST00000565265 298 ntBASIC6.79□□□□□ -1.32
SOX1O00570 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC6.79□□□□□ -1.32
SOX1O00570 AC090616.5-202ENST00000582111 297 ntBASIC6.79□□□□□ -1.32
SOX1O00570 MIR4697-201ENST00000582977 78 ntBASIC6.79□□□□□ -1.32
SOX1O00570 AL390838.2-201ENST00000602394 274 ntBASIC6.79□□□□□ -1.32
SOX1O00570 AC133552.5-201ENST00000604266 540 ntBASIC6.79□□□□□ -1.32
SOX1O00570 BNIP3P4-201ENST00000604946 565 ntBASIC6.79□□□□□ -1.32
SOX1O00570 AC091834.1-201ENST00000614543 472 ntBASIC6.79□□□□□ -1.32
SOX1O00570 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.79□□□□□ -1.32
SOX1O00570 AC138649.3-201ENST00000622154 254 ntBASIC6.79□□□□□ -1.32
SOX1O00570 AL359697.1-201ENST00000624879 587 ntBASIC6.79□□□□□ -1.32
SOX1O00570 AC026951.1-201ENST00000559530 2459 ntBASIC6.79□□□□□ -1.32
SOX1O00570 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX1O00570 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
SOX1O00570 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SOX1O00570 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SOX1O00570 RBMY1HP-201ENST00000382759 1389 ntBASIC6.79□□□□□ -1.32
SOX1O00570 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.79□□□□□ -1.32
SOX1O00570 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
SOX1O00570 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC6.79□□□□□ -1.32
SOX1O00570 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SOX1O00570 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX1O00570 AL136984.1-201ENST00000607611 1893 ntBASIC6.79□□□□□ -1.32
SOX1O00570 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SOX1O00570 AC131971.1-201ENST00000332881 1482 ntBASIC6.79□□□□□ -1.32
SOX1O00570 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
SOX1O00570 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SOX1O00570 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SOX1O00570 AC017104.4-201ENST00000636283 1592 ntBASIC6.78□□□□□ -1.32
SOX1O00570 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SOX1O00570 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SOX1O00570 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SOX1O00570 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SOX1O00570 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SOX1O00570 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
SOX1O00570 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SOX1O00570 CASC19-243ENST00000641588 1546 ntBASIC6.78□□□□□ -1.32
SOX1O00570 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
SOX1O00570 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SOX1O00570 FAR2P2-201ENST00000413041 594 ntBASIC6.78□□□□□ -1.32
SOX1O00570 AC245096.1-201ENST00000413104 546 ntBASIC6.78□□□□□ -1.32
SOX1O00570 AC009237.2-201ENST00000421358 284 ntBASIC6.78□□□□□ -1.32
SOX1O00570 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SOX1O00570 AC233728.2-201ENST00000425348 757 ntBASIC6.78□□□□□ -1.32
SOX1O00570 FAR2P4-202ENST00000425399 584 ntBASIC6.78□□□□□ -1.32
SOX1O00570 RPS7P14-201ENST00000426405 583 ntBASIC6.78□□□□□ -1.32
SOX1O00570 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.78□□□□□ -1.32
SOX1O00570 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.78□□□□□ -1.32
SOX1O00570 RPL31P54-201ENST00000429803 370 ntBASIC6.78□□□□□ -1.32
SOX1O00570 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC6.78□□□□□ -1.32
SOX1O00570 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.78□□□□□ -1.32
SOX1O00570 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.78□□□□□ -1.32
SOX1O00570 AC114755.4-201ENST00000439114 443 ntBASIC6.78□□□□□ -1.32
SOX1O00570 CYCSP51-201ENST00000443545 318 ntBASIC6.78□□□□□ -1.32
SOX1O00570 GDI2P2-201ENST00000445131 608 ntBASIC6.78□□□□□ -1.32
SOX1O00570 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC6.78□□□□□ -1.32
SOX1O00570 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.78□□□□□ -1.32
SOX1O00570 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.78□□□□□ -1.32
SOX1O00570 RN7SL870P-201ENST00000460111 296 ntBASIC6.78□□□□□ -1.32
SOX1O00570 RN7SL382P-201ENST00000482631 282 ntBASIC6.78□□□□□ -1.32
SOX1O00570 DYNLL1P6-201ENST00000503440 264 ntBASIC6.78□□□□□ -1.32
SOX1O00570 AC021220.1-201ENST00000507445 630 ntBASIC6.78□□□□□ -1.32
SOX1O00570 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC6.78□□□□□ -1.32
SOX1O00570 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.78□□□□□ -1.32
SOX1O00570 RNU6-875P-201ENST00000516488 106 ntBASIC6.78□□□□□ -1.32
SOX1O00570 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC6.78□□□□□ -1.32
SOX1O00570 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SOX1O00570 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC6.78□□□□□ -1.32
SOX1O00570 AP005639.2-201ENST00000527592 928 ntBASIC6.78□□□□□ -1.32
SOX1O00570 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC6.78□□□□□ -1.32
SOX1O00570 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SOX1O00570 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.78□□□□□ -1.32
SOX1O00570 CR383656.6-201ENST00000550518 394 ntBASIC6.78□□□□□ -1.32
SOX1O00570 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SOX1O00570 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SOX1O00570 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.78□□□□□ -1.32
SOX1O00570 MIR548AB-201ENST00000584917 84 ntBASIC6.78□□□□□ -1.32
SOX1O00570 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC6.78□□□□□ -1.32
SOX1O00570 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.78□□□□□ -1.32
SOX1O00570 AC024560.3-201ENST00000608482 349 ntBASIC6.78□□□□□ -1.32
SOX1O00570 AL353726.1-201ENST00000614041 1000 ntBASIC6.78□□□□□ -1.32
SOX1O00570 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.78□□□□□ -1.32
SOX1O00570 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC6.78□□□□□ -1.32
SOX1O00570 FAM157B-203ENST00000639350 358 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms