Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RN7SKP276-201ENST00000516242 268 ntBASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC020910.3-201ENST00000603701 874 ntBASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC012557.1-201ENST00000607115 611 ntBASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC019206.1-201ENST00000621938 425 ntBASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.77□□□□□ -1.65
TMX2-CTNND1H3BSU7 DDX18P6-201ENST00000450119 1997 ntBASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 THAP12P8-201ENST00000447914 2115 ntBASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 ATP5HP3-201ENST00000396994 486 ntBASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 SNORA77-201ENST00000408716 125 ntBASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC092447.2-201ENST00000435487 669 ntBASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC234781.3-201ENST00000452540 973 ntBASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 RPL10P17-201ENST00000453852 316 ntBASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 RPS5P7-201ENST00000456664 608 ntBASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 snoU13.1-201ENST00000459157 104 ntBASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC010326.1-201ENST00000462726 602 ntBASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 RN7SKP92-201ENST00000517266 244 ntBASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 C1GALT1P3-201ENST00000522049 819 ntBASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC018552.1-201ENST00000562099 811 ntBASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC027228.2-201ENST00000567141 2154 ntBASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 MIR5096-201ENST00000583713 70 ntBASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC021106.3-201ENST00000623925 531 ntBASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TMX2-CTNND1H3BSU7 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 ECM1P2-201ENST00000503354 1577 ntBASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 RNA5SP505-201ENST00000364748 108 ntBASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 FABP12P1-201ENST00000401911 322 ntBASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 RNU6-233P-201ENST00000410845 141 ntBASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 GTF2IP5-201ENST00000414608 731 ntBASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 CNOT7P1-201ENST00000429006 852 ntBASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC091390.1-201ENST00000433904 331 ntBASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 AP000942.1-201ENST00000463969 747 ntBASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 RN7SL354P-201ENST00000469282 294 ntBASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 RN7SL459P-201ENST00000481078 302 ntBASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 MRPS33P2-201ENST00000507850 322 ntBASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 SOX5P1-201ENST00000524155 1127 ntBASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC008745.1-201ENST00000604064 271 ntBASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 BTBD10P1-201ENST00000549824 1352 ntBASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 AL513548.1-201ENST00000562904 1724 ntBASIC4.75□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 AC005332.5-201ENST00000591222 2919 ntBASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 AL356317.1-201ENST00000396110 1436 ntBASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 MTCO1P15-201ENST00000529569 1526 ntBASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.74□□□□□ -1.65
TMX2-CTNND1H3BSU7 OR4K15-201ENST00000305051 1216 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms