Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 OR52B1P-201ENST00000316506 909 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 OR9K1P-201ENST00000326513 941 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 RNU6-451P-201ENST00000362921 107 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 RNU6-289P-201ENST00000364093 107 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 RNU6-1055P-201ENST00000391085 107 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 MTCO3P12-201ENST00000416718 547 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AC109638.1-201ENST00000417406 326 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 PDCL2P1-201ENST00000419302 352 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AL353193.1-201ENST00000421444 268 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AL354983.1-201ENST00000434580 906 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 RN7SL325P-201ENST00000460434 283 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AC021660.1-201ENST00000465006 554 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 RPL23AP12-201ENST00000467573 473 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 RN7SL815P-201ENST00000470970 290 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AC026254.2-201ENST00000475295 371 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 RPL5P12-201ENST00000477071 851 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 RN7SL282P-201ENST00000479676 297 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 CEACAMP3-202ENST00000483806 638 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 RN7SL314P-201ENST00000490735 292 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AC117383.2-201ENST00000514722 322 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 SNORA19.2-201ENST00000516013 114 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 Vault.3-201ENST00000516676 95 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AC068631.3-201ENST00000538831 225 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 HPRT1P3-201ENST00000539521 576 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AC011468.4-201ENST00000603942 409 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 RMST_3.1-201ENST00000611651 109 ntBASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 HDAC1P2-201ENST00000453661 1398 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 ATP8A2P2-201ENST00000437678 1568 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 AC020978.6-201ENST00000571197 3177 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 RNA5SP396-201ENST00000364834 120 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 ARMCX7P-201ENST00000372828 562 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 SNRPFP1-201ENST00000414761 252 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 MRPL50P2-201ENST00000416821 482 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 AC017104.2-201ENST00000417000 321 ntBASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDHGA11Q9Y5H2 CBWD4P-201ENST00000445695 655 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms