Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 RBPJP5-201ENST00000449433 1447 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 AC106872.5-201ENST00000508856 1416 ntBASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA3Q9Y5H0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 MTCO1P7-201ENST00000419523 1542 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 MIR133A2-201ENST00000347538 102 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 RNU6-560P-201ENST00000364007 108 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 MIR16-1-201ENST00000385271 89 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 RN7SKP286-201ENST00000410894 299 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AL009174.1-201ENST00000426577 416 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AC073069.1-201ENST00000428657 441 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 MOB1AP1-201ENST00000430903 535 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 HMGB1P45-201ENST00000435986 653 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 PCBP2P1-201ENST00000437262 977 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AP000936.3-201ENST00000438127 255 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AC079922.1-201ENST00000443291 359 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 ATG12P2-201ENST00000456830 416 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AL445687.2-201ENST00000458156 728 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AC026348.1-201ENST00000462549 1053 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AC011979.1-201ENST00000472300 483 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AL035690.1-201ENST00000490892 383 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AC091951.3-201ENST00000504093 246 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 FABP5P12-201ENST00000515543 389 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AP003461.1-201ENST00000528866 78 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AC010487.1-201ENST00000594408 1172 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 RNA5SP440-201ENST00000612665 119 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AC096861.1-201ENST00000616652 240 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AL035661.1-201ENST00000620459 1144 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AC015726.3-201ENST00000624501 418 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AC073869.7-201ENST00000640874 297 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 BX005019.1-201ENST00000561881 1810 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AC092692.1-201ENST00000623625 2595 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AC027088.4-201ENST00000611559 1947 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 AC025263.3-201ENST00000622965 1396 ntBASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA3Q9Y5H0 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 PWAR1-201ENST00000624188 2414 ntBASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 SNORD113-6-201ENST00000363345 75 ntBASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 SNORD116.1-201ENST00000365628 92 ntBASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 AL096829.1-201ENST00000413677 457 ntBASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 UBE2V1P14-201ENST00000415815 558 ntBASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 AC114814.2-201ENST00000419195 485 ntBASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHGA3Q9Y5H0 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms