Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 ZNF663P-202ENST00000641770 1131 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 MFSD8-239ENST00000641590 2479 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 AC104454.1-201ENST00000421341 1401 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 RNA5SP46-201ENST00000362370 120 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 RNA5SP394-201ENST00000364216 119 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 RNU6-413P-201ENST00000384115 107 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 AL008987.1-201ENST00000415528 237 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 OR4K6P-201ENST00000416478 897 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 NPM1P22-201ENST00000427761 952 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 KATNBL1P3-201ENST00000443475 909 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 EEF1B2P6-201ENST00000445713 673 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 EXTL2P1-201ENST00000446218 416 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 RPL31P44-201ENST00000447680 377 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 RPL12P39-201ENST00000455456 496 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 USP9YP25-201ENST00000457708 443 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 RPL7P40-201ENST00000481703 745 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 PPP1R11P1-201ENST00000486095 376 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 AC010486.2-201ENST00000505572 483 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 AC010486.3-201ENST00000511602 785 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 RNU5A-4P-201ENST00000516588 111 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 POLR2KP1-201ENST00000553226 168 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 AC022662.1-201ENST00000580252 331 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 AC015688.2-201ENST00000584523 262 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 AP001269.3-201ENST00000588718 329 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 MTND3P19-201ENST00000603825 345 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 DPRXP5-201ENST00000604662 539 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 HIRAP1-201ENST00000605318 787 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 AL583856.2-201ENST00000606298 543 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 AC064807.4-201ENST00000607201 407 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 AL162574.1-201ENST00000615702 950 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 AC139769.3-201ENST00000618383 175 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 VN1R7P-201ENST00000619242 903 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 MIR1322-201ENST00000638013 71 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 MTND5P31-201ENST00000419366 1374 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 AL359955.1-201ENST00000455242 3275 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 AL137100.1-201ENST00000556703 1620 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 VPS35P1-201ENST00000563400 1518 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 AC104446.1-201ENST00000613728 1321 ntBASIC5.74□□□□□ -1.49
PCDHB1Q9Y5F3 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
PCDHB1Q9Y5F3 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms