Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 OFD1P3Y-201ENST00000453312 783 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 RPS3AP53-201ENST00000454716 778 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 NPM1P29-201ENST00000483112 803 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 PPIAP19-201ENST00000486414 492 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 OR9N1P-202ENST00000494289 481 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AC034244.2-201ENST00000514668 858 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AC105031.1-201ENST00000518550 476 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 MTND2P32-201ENST00000521584 1038 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AC112191.2-201ENST00000522428 333 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AC104115.2-201ENST00000523026 687 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 HMGB1P40-201ENST00000525121 540 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 OSBPL9P3-201ENST00000534523 595 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AC010547.6-201ENST00000571789 193 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 MIR4472-2-201ENST00000582069 67 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AC011840.5-201ENST00000582125 771 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AL135786.2-201ENST00000608422 615 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AC004241.3-201ENST00000611728 517 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AC018926.1-201ENST00000616335 435 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AC037198.3-201ENST00000616754 526 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AC118658.2-201ENST00000618697 459 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AC026124.2-201ENST00000621847 656 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AC073342.3-201ENST00000624211 193 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AC073869.10-201ENST00000642016 354 ntBASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
MRPS28Q9Y2Q9 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.46□□□□□ -1.69
MRPS28Q9Y2Q9 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.46□□□□□ -1.69
MRPS28Q9Y2Q9 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.46□□□□□ -1.69
MRPS28Q9Y2Q9 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 RN7SKP292-201ENST00000365522 317 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 AC013429.2-201ENST00000418798 781 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 AL606495.1-201ENST00000422100 813 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 NAP1L4P2-201ENST00000425958 899 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 USP12PY-201ENST00000427677 1064 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 AC009238.2-201ENST00000431026 355 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 MTATP6P17-201ENST00000431030 672 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 SUMO2P3-201ENST00000438311 288 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 MRPL35P2-201ENST00000448009 511 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 AL157884.3-201ENST00000448273 1184 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 AC091180.1-201ENST00000462104 372 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 AC090638.1-201ENST00000498296 909 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 RFPL4AP5-201ENST00000514977 504 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 AP003066.2-201ENST00000529375 555 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 BLZF2P-201ENST00000553776 1130 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 AGGF1P9-201ENST00000561884 913 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 AC015720.2-201ENST00000567709 334 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 RBM22P1-201ENST00000578589 1214 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 CLIC4P2-201ENST00000601934 717 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 AC000068.2-201ENST00000608816 460 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 AL139407.1-201ENST00000613826 1175 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms