Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
SHANK2Q9UPX8 VN2R3P-201ENST00000422626 1412 ntBASIC6.96□□□□□ -1.3
SHANK2Q9UPX8 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
SHANK2Q9UPX8 RNA5SP387-201ENST00000364226 106 ntBASIC6.96□□□□□ -1.3
SHANK2Q9UPX8 RNU1-13P-201ENST00000384499 162 ntBASIC6.96□□□□□ -1.3
SHANK2Q9UPX8 RPL7AP25-201ENST00000423357 805 ntBASIC6.96□□□□□ -1.3
SHANK2Q9UPX8 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.96□□□□□ -1.3
SHANK2Q9UPX8 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.96□□□□□ -1.3
SHANK2Q9UPX8 MRPL49P2-201ENST00000521066 465 ntBASIC6.96□□□□□ -1.3
SHANK2Q9UPX8 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.96□□□□□ -1.3
SHANK2Q9UPX8 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.96□□□□□ -1.3
SHANK2Q9UPX8 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.96□□□□□ -1.3
SHANK2Q9UPX8 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC6.96□□□□□ -1.3
SHANK2Q9UPX8 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.96□□□□□ -1.3
SHANK2Q9UPX8 AC023043.4-201ENST00000612081 449 ntBASIC6.96□□□□□ -1.3
SHANK2Q9UPX8 AL133243.1-201ENST00000614487 366 ntBASIC6.96□□□□□ -1.3
SHANK2Q9UPX8 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SHANK2Q9UPX8 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SHANK2Q9UPX8 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SHANK2Q9UPX8 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC6.96□□□□□ -1.3
SHANK2Q9UPX8 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 ADAM5-202ENST00000399789 1942 ntBASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 AC013429.2-201ENST00000418798 781 ntBASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 AL356387.2-201ENST00000422272 243 ntBASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 AC245028.2-201ENST00000458673 253 ntBASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 MTCO1P49-201ENST00000523429 802 ntBASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 AC011477.5-201ENST00000586571 259 ntBASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 AC005899.7-201ENST00000618199 588 ntBASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 AC090220.1-201ENST00000593078 1699 ntBASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHANK2Q9UPX8 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 NDUFA5P1-201ENST00000433858 341 ntBASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 PHBP16-201ENST00000446318 950 ntBASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 AC104651.2-201ENST00000447549 528 ntBASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 CYCSP40-201ENST00000575927 294 ntBASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 AP001160.4-201ENST00000596971 382 ntBASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 AC114781.5-201ENST00000615297 108 ntBASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHANK2Q9UPX8 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 RNU1-94P-201ENST00000362627 173 ntBASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 RPL23AP59-201ENST00000399415 461 ntBASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 RN7SL542P-201ENST00000467147 294 ntBASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 AL445567.2-201ENST00000618935 498 ntBASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SHANK2Q9UPX8 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms