Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SHROOM4Q9ULL8 IGKV7-3-201ENST00000357453 298 ntBASIC9.26□□□□□ -0.93
SHROOM4Q9ULL8 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SHROOM4Q9ULL8 NCLP2-201ENST00000416078 1462 ntBASIC9.26□□□□□ -0.93
SHROOM4Q9ULL8 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC9.26□□□□□ -0.93
SHROOM4Q9ULL8 RPEP3-201ENST00000425462 676 ntBASIC9.26□□□□□ -0.93
SHROOM4Q9ULL8 AP002812.1-201ENST00000495378 474 ntBASIC9.26□□□□□ -0.93
SHROOM4Q9ULL8 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SHROOM4Q9ULL8 AC068446.1-201ENST00000556425 1549 ntBASIC9.26□□□□□ -0.93
SHROOM4Q9ULL8 PRPF19P1-201ENST00000584766 898 ntBASIC9.26□□□□□ -0.93
SHROOM4Q9ULL8 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC9.26□□□□□ -0.93
SHROOM4Q9ULL8 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC9.26□□□□□ -0.93
SHROOM4Q9ULL8 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC9.26□□□□□ -0.93
SHROOM4Q9ULL8 RNF123-214ENST00000629802 207 ntTSL 5 BASIC9.26□□□□□ -0.93
SHROOM4Q9ULL8 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SHROOM4Q9ULL8 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SHROOM4Q9ULL8 AL669831.5-218ENST00000591702 1873 ntBASIC9.25□□□□□ -0.93
SHROOM4Q9ULL8 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC9.25□□□□□ -0.93
SHROOM4Q9ULL8 RNU1-64P-201ENST00000365443 163 ntBASIC9.25□□□□□ -0.93
SHROOM4Q9ULL8 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC9.25□□□□□ -0.93
SHROOM4Q9ULL8 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC9.25□□□□□ -0.93
SHROOM4Q9ULL8 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
SHROOM4Q9ULL8 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC9.25□□□□□ -0.93
SHROOM4Q9ULL8 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC9.25□□□□□ -0.93
SHROOM4Q9ULL8 C1DP3-201ENST00000455013 423 ntBASIC9.25□□□□□ -0.93
SHROOM4Q9ULL8 AK5-208ENST00000478255 556 ntTSL 2 BASIC9.25□□□□□ -0.93
SHROOM4Q9ULL8 AC008126.1-201ENST00000549019 480 ntBASIC9.25□□□□□ -0.93
SHROOM4Q9ULL8 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
SHROOM4Q9ULL8 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC9.25□□□□□ -0.93
SHROOM4Q9ULL8 AC034105.4-201ENST00000568304 277 ntBASIC9.25□□□□□ -0.93
SHROOM4Q9ULL8 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
SHROOM4Q9ULL8 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SHROOM4Q9ULL8 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC9.25□□□□□ -0.93
SHROOM4Q9ULL8 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
SHROOM4Q9ULL8 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
SHROOM4Q9ULL8 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC9.25□□□□□ -0.93
SHROOM4Q9ULL8 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
SHROOM4Q9ULL8 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
SHROOM4Q9ULL8 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
SHROOM4Q9ULL8 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
SHROOM4Q9ULL8 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SHROOM4Q9ULL8 NRBF2P2-201ENST00000413087 861 ntBASIC9.24□□□□□ -0.93
SHROOM4Q9ULL8 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
SHROOM4Q9ULL8 AC015795.1-201ENST00000513669 327 ntBASIC9.24□□□□□ -0.93
SHROOM4Q9ULL8 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC9.24□□□□□ -0.93
SHROOM4Q9ULL8 AL049839.1-201ENST00000556151 657 ntBASIC9.24□□□□□ -0.93
SHROOM4Q9ULL8 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC9.24□□□□□ -0.93
SHROOM4Q9ULL8 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC9.24□□□□□ -0.93
SHROOM4Q9ULL8 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SHROOM4Q9ULL8 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC9.24□□□□□ -0.93
SHROOM4Q9ULL8 AC019206.1-201ENST00000621938 425 ntBASIC9.24□□□□□ -0.93
SHROOM4Q9ULL8 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
SHROOM4Q9ULL8 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SHROOM4Q9ULL8 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SHROOM4Q9ULL8 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SHROOM4Q9ULL8 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC9.24□□□□□ -0.93
SHROOM4Q9ULL8 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SHROOM4Q9ULL8 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 SAMMSON-210ENST00000641260 1308 ntBASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 RN7SL441P-201ENST00000492388 296 ntBASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 RNU2-30P-201ENST00000516209 141 ntBASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 OR8G5-201ENST00000524943 1041 ntBASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 AC009268.1-201ENST00000561352 1203 ntBASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 MIR4429-201ENST00000580105 73 ntBASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 AC022387.2-201ENST00000604050 448 ntBASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 AC008785.1-201ENST00000624475 456 ntBASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
SHROOM4Q9ULL8 ALB-202ENST00000401494 1659 ntTSL 5 BASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 RPL32P23-201ENST00000397237 405 ntBASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 ST13P16-201ENST00000401760 781 ntBASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 AL139039.2-201ENST00000407436 479 ntBASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 RNU6-564P-201ENST00000410983 104 ntBASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 LINC01881-201ENST00000416103 412 ntBASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 AC073052.1-201ENST00000440417 714 ntBASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 RPL31P53-201ENST00000457065 348 ntBASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 AC108751.3-201ENST00000461814 1020 ntBASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC9.22□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms