Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL20A1Q9P218 THAP12P4-201ENST00000528321 2266 ntBASIC5.91□□□□□ -1.46
COL20A1Q9P218 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL20A1Q9P218 AL355834.1-201ENST00000556602 3965 ntBASIC5.91□□□□□ -1.46
COL20A1Q9P218 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 NCOA4P2-201ENST00000340589 1813 ntBASIC5.91□□□□□ -1.46
COL20A1Q9P218 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL20A1Q9P218 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 SNORA51.8-201ENST00000384234 132 ntBASIC5.91□□□□□ -1.46
COL20A1Q9P218 MIR589-201ENST00000385238 99 ntBASIC5.91□□□□□ -1.46
COL20A1Q9P218 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL20A1Q9P218 HMGB1P13-201ENST00000406019 642 ntBASIC5.91□□□□□ -1.46
COL20A1Q9P218 GJA6P-201ENST00000415117 1042 ntBASIC5.91□□□□□ -1.46
COL20A1Q9P218 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 AC005189.1-201ENST00000431286 310 ntBASIC5.91□□□□□ -1.46
COL20A1Q9P218 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL20A1Q9P218 RPS29P10-201ENST00000439197 166 ntBASIC5.91□□□□□ -1.46
COL20A1Q9P218 RPS20P4-201ENST00000461659 355 ntBASIC5.91□□□□□ -1.46
COL20A1Q9P218 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 EIF4A2P5-201ENST00000529914 499 ntBASIC5.91□□□□□ -1.46
COL20A1Q9P218 OR5D15P-201ENST00000531671 942 ntBASIC5.91□□□□□ -1.46
COL20A1Q9P218 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 MIR4700-201ENST00000578311 74 ntBASIC5.91□□□□□ -1.46
COL20A1Q9P218 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 AC018618.2-201ENST00000604770 446 ntBASIC5.91□□□□□ -1.46
COL20A1Q9P218 AC112220.2-201ENST00000605513 533 ntBASIC5.91□□□□□ -1.46
COL20A1Q9P218 AC093673.2-201ENST00000609674 331 ntBASIC5.91□□□□□ -1.46
COL20A1Q9P218 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 AC135068.12-201ENST00000637370 931 ntBASIC5.91□□□□□ -1.46
COL20A1Q9P218 AP001153.1-201ENST00000641024 338 ntBASIC5.91□□□□□ -1.46
COL20A1Q9P218 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL20A1Q9P218 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 UGT2B26P-201ENST00000508672 1613 ntBASIC5.91□□□□□ -1.46
COL20A1Q9P218 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.91□□□□□ -1.46
COL20A1Q9P218 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL20A1Q9P218 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL20A1Q9P218 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL20A1Q9P218 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL20A1Q9P218 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
COL20A1Q9P218 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL20A1Q9P218 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.9□□□□□ -1.46
COL20A1Q9P218 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.9□□□□□ -1.46
COL20A1Q9P218 OR9G4-201ENST00000302957 984 ntBASIC5.9□□□□□ -1.46
COL20A1Q9P218 RNA5SP455-201ENST00000365190 119 ntBASIC5.9□□□□□ -1.46
COL20A1Q9P218 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL20A1Q9P218 RN7SKP114-201ENST00000410327 279 ntBASIC5.9□□□□□ -1.46
COL20A1Q9P218 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.9□□□□□ -1.46
COL20A1Q9P218 RBMY2KP-201ENST00000418221 992 ntBASIC5.9□□□□□ -1.46
COL20A1Q9P218 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.9□□□□□ -1.46
COL20A1Q9P218 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL20A1Q9P218 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.9□□□□□ -1.46
COL20A1Q9P218 AC009784.1-201ENST00000426484 460 ntBASIC5.9□□□□□ -1.46
COL20A1Q9P218 RPL23AP4-201ENST00000427757 463 ntBASIC5.9□□□□□ -1.46
COL20A1Q9P218 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.9□□□□□ -1.46
COL20A1Q9P218 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.9□□□□□ -1.46
COL20A1Q9P218 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.9□□□□□ -1.46
COL20A1Q9P218 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.9□□□□□ -1.46
COL20A1Q9P218 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.9□□□□□ -1.46
COL20A1Q9P218 TRY2P-201ENST00000448860 689 ntBASIC5.9□□□□□ -1.46
COL20A1Q9P218 HIGD1AP8-201ENST00000453927 274 ntBASIC5.9□□□□□ -1.46
COL20A1Q9P218 HSPE1P22-201ENST00000456856 327 ntBASIC5.9□□□□□ -1.46
COL20A1Q9P218 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.9□□□□□ -1.46
COL20A1Q9P218 RN7SL814P-201ENST00000487715 300 ntBASIC5.9□□□□□ -1.46
COL20A1Q9P218 RN7SL591P-201ENST00000496150 292 ntBASIC5.9□□□□□ -1.46
COL20A1Q9P218 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL20A1Q9P218 AC090058.1-201ENST00000498788 435 ntBASIC5.9□□□□□ -1.46
COL20A1Q9P218 CDH12P2-201ENST00000504393 298 ntBASIC5.9□□□□□ -1.46
COL20A1Q9P218 ASNSP4-201ENST00000511103 447 ntBASIC5.9□□□□□ -1.46
COL20A1Q9P218 MTCO2P2-201ENST00000591258 225 ntBASIC5.9□□□□□ -1.46
COL20A1Q9P218 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.9□□□□□ -1.46
COL20A1Q9P218 AL022067.1-201ENST00000602426 454 ntBASIC5.9□□□□□ -1.46
COL20A1Q9P218 AC116651.1-201ENST00000609724 556 ntBASIC5.9□□□□□ -1.46
COL20A1Q9P218 CYCSP41-201ENST00000616920 296 ntBASIC5.9□□□□□ -1.46
COL20A1Q9P218 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.9□□□□□ -1.46
COL20A1Q9P218 AC024023.1-201ENST00000624530 922 ntBASIC5.9□□□□□ -1.46
COL20A1Q9P218 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.9□□□□□ -1.46
COL20A1Q9P218 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
COL20A1Q9P218 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL20A1Q9P218 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL20A1Q9P218 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL20A1Q9P218 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL20A1Q9P218 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL20A1Q9P218 MSL3P1-202ENST00000440028 1468 ntBASIC5.9□□□□□ -1.47
COL20A1Q9P218 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.9□□□□□ -1.47
COL20A1Q9P218 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
COL20A1Q9P218 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms